DRSC/TRiP Functional Genomics Resources

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Protein Alignment exex and Hoxa6

DIOPT Version :9

Sequence 1:NP_648164.1 Gene:exex / 38884 FlyBaseID:FBgn0041156 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_034584.1 Gene:Hoxa6 / 15403 MGIID:96178 Length:232 Species:Mus musculus


Alignment Length:244 Identity:76/244 - (31%)
Similarity:94/244 - (38%) Gaps:87/244 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   344 MSDFHDEFKKPIPPHSPIRPQD-----FPLYAGGHP------------------------YQ--- 376
            ||.:   |..|..|.|....||     .|||..|:.                        ||   
Mouse     1 MSSY---FVNPTFPGSLPSGQDSFLGQLPLYPAGYDALRPFPASYGASSLPDKTYTSPCFYQQSN 62

  Fly   377 -LLA-------QGGSAFHRPLDPSGKPIPIPMGHN----------FMPSQ-------LQFEFLAR 416
             :||       .|.|.|:...|.||..   |.|:|          |.|.|       :|.:.|..
Mouse    63 SVLACNRASYEYGASCFYSDKDLSGAS---PSGNNKQRGPGDYLHFSPEQQYKPDGSVQGKALHE 124

  Fly   417 AG------------MLHHRIPELAAYPHHAILGKTRRPRTAFTSQQLLELEKQFKQNKYLSRPKR 469
            .|            |........|.|..|.     ||.|..:|..|.|||||:|..|:||:|.:|
Mouse   125 EGTDRKYTSPVYPWMQRMNSCAGAVYGSHG-----RRGRQTYTRYQTLELEKEFHFNRYLTRRRR 184

  Fly   470 FEVASGLMLSETQVKIWFQNRRMKWKRSKK------AQQEAKERAKANQ 512
            .|:|:.|.|:|.|:||||||||||||:..|      |..|..| |||.:
Mouse   185 IEIANALCLTERQIKIWFQNRRMKWKKENKLINSTQASGEDSE-AKAGE 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
exexNP_648164.1 Homeobox 442..495 CDD:278475 30/52 (58%)
Hoxa6NP_034584.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 88..126 8/40 (20%)
Antp-type hexapeptide 135..140 0/4 (0%)
Homeobox 158..210 CDD:278475 30/51 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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