DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment exex and Hoxa2

DIOPT Version :9

Sequence 1:NP_648164.1 Gene:exex / 38884 FlyBaseID:FBgn0041156 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_034581.1 Gene:Hoxa2 / 15399 MGIID:96174 Length:372 Species:Mus musculus


Alignment Length:265 Identity:78/265 - (29%)
Similarity:105/265 - (39%) Gaps:88/265 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   317 SSPPI-----SPGCEDQQQPHGALHPQHLSMRMSDFHDEFKKPIPPHSPIRPQDFPLYAGGHPYQ 376
            |.||:     |...:.....|..|.|           ..|::.||..:|          |.||..
Mouse    24 SFPPVADTFQSSSIKTSTLSHSTLIP-----------PPFEQTIPSLNP----------GSHPRH 67

  Fly   377 LLAQGGSAFHRPLDPSGKPIPI----PMGHNFMPSQLQFEFLARAGMLHHRIPELAAYPHHAILG 437
            ....||.....|....|.|:|.    |..:.:|..:...:..|        :|..||....|.||
Mouse    68 GAGVGGRPKSSPAGSRGSPVPAGALQPPEYPWMKEKKAAKKTA--------LPPAAASTGPACLG 124

  Fly   438 K-------------TRRPRTAFTSQQLLELEKQFKQNKYLSRPKRFEVASGLMLSETQVKIWFQN 489
            .             :||.|||:|:.|||||||:|..||||.||:|.|:|:.|.|:|.|||:||||
Mouse   125 HKESLEIADGSGGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQN 189

  Fly   490 RRMKWKR-------------------SKKAQQEAKERAKANQ----------------QQQ--QQ 517
            ||||.||                   |.|.:::.:|::...|                ||.  .|
Mouse   190 RRMKHKRQTQCKENQNSEGKFKNLEDSDKVEEDEEEKSLFEQALSVSGALLEREGYTFQQNALSQ 254

  Fly   518 QQTPS 522
            ||.|:
Mouse   255 QQAPN 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
exexNP_648164.1 Homeobox 442..495 CDD:278475 35/52 (67%)
Hoxa2NP_034581.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 48..95 14/67 (21%)
Antp-type hexapeptide 96..101 0/4 (0%)
Homeobox 143..195 CDD:278475 35/51 (69%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..225 4/30 (13%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.