DRSC/TRiP Functional Genomics Resources

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Protein Alignment exex and Hoxb2

DIOPT Version :9

Sequence 1:NP_648164.1 Gene:exex / 38884 FlyBaseID:FBgn0041156 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_598793.2 Gene:Hoxb2 / 103889 MGIID:96183 Length:354 Species:Mus musculus


Alignment Length:190 Identity:67/190 - (35%)
Similarity:84/190 - (44%) Gaps:43/190 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   355 IPPHSPIRPQDFP-LYAGGHPYQLLAQGGSAFHRPLDPSGKPIPI-PMGHNF----------MPS 407
            |||..|:. |.|| |..|....|.......|...|...|..|:|: |....|          .||
Mouse    43 IPPPPPLE-QTFPSLQLGASTLQRPGSQKQAGDGPALRSPPPLPVAPPAPEFPWMKEKKSTKKPS 106

  Fly   408 QLQFEFLARAGMLHHR----------IPELAAYPHHAILGKTRRPRTAFTSQQLLELEKQFKQNK 462
            |........|..:...          :||...       ..:||.|||:|:.|||||||:|..||
Mouse   107 QSAASPSPAASSVRASEVGSPSDGPGLPECGG-------SGSRRLRTAYTNTQLLELEKEFHFNK 164

  Fly   463 YLSRPKRFEVASGLMLSETQVKIWFQNRRMKWKRSKK-------------AQQEAKERAK 509
            ||.||:|.|:|:.|.|:|.|||:||||||||.||..:             ||.:|.|.|:
Mouse   165 YLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQHREPPEGEPGGPSAQDDAGEPAE 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
exexNP_648164.1 Homeobox 442..495 CDD:278475 35/52 (67%)
Hoxb2NP_598793.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..143 23/107 (21%)
Antp-type hexapeptide 92..97 1/4 (25%)
Homeobox 145..197 CDD:278475 35/51 (69%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 193..231 10/32 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 246..295
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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