Protein Alignment exex and Hoxa3

DIOPT Version :9

• Sequence 1: NP_648164.1
• Gene: exex / 38884
• FlyBaseID: FBgn0041156
• Length: 525
• Species: Drosophila melanogaster
• Sequence 2: NP_001300749.1
• Gene: Hoxa3 / 103690130
• RGDID: 1561431
• Length: 444
• Species: Rattus norvegicus
• Alignment Length: 439
• Identity: 99/439 - (22%)
• Similarity: 130/439 - (29%)
• Gaps: 232/439 - (52%)

  Fly    79 PTHSAATTGSP-VSTYTPALS-----PGGAQDSS--------QTESGQSSQMPLLVAPMPVGTGP 129
            |...:||.|:. |..:.||.|     ..||...|        :|.||..||        |.|.|.
  Rat    32 PYAPSATLGTDGVEYHRPACSLQSPASAGAHPKSHELSEACLRTLSGPPSQ--------PPGLGD 88

  Fly   130 PHSHPPPPHPRLYVEGFPPPHHVPHPHPALGTYPLPRLPLMLPANPPGVPSGAAAPPP--VSPQP 192
            |...||||      :..||....|.|                |..|| .|:.||.|||  |||..
  Rat    89 PPLPPPPP------QAAPPAPQPPQP----------------PPQPP-APTPAAPPPPSSVSPPQ 130

  Fly   193 AANHLSHSGATMATTTLLPPAQSQPKKSFCIDALLAKSQHQSGEPQPIIVDDRLAALHYARDQAE 257
            :||    |..|.|:|                    |||        |:
  Rat   131 SAN----SNPTPAST--------------------AKS--------PL----------------- 146

  Fly   258 LNHAFVTASNAAAAAQAAASAAGGISEQEALQRIRDSREYDSPSPDGMSRSESPTSSHRSSPPIS 322
            ||...|                    .::....:::||:.......|.|..||
  Rat   147 LNSPTV--------------------GKQIFPWMKESRQNTKQKTSGSSSGES------------ 179

  Fly   323 PGCEDQQQPHGALHPQHLSMRMSDFHDEFKKPIPPHSPIRPQDFPLYAGGHPYQLLAQGGSAFHR 387
              |...:.|.|.
  Rat   180 --CAGDKSPPGQ----------------------------------------------------- 189

  Fly   388 PLDPSGKPIPIPMGHNFMPSQLQFEFLARAGMLHHRIPELAAYPHHAILGKTRRPRTAFTSQQLL 452
                                                             ..::|.|||:||.||:
  Rat   190 -------------------------------------------------ASSKRARTAYTSAQLV 205

  Fly   453 ELEKQFKQNKYLSRPKRFEVASGLMLSETQVKIWFQNRRMKWKRSKKAQ 501
            ||||:|..|:||.||:|.|:|:.|.|:|.|:||||||||||:|:.:|.:
  Rat   206 ELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKGK 254

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
exex	NP_648164.1	Homeobox	442..495	CDD:278475	34/52 (65%)
Hoxa3	NP_001300749.1	COG5576	<182..309	CDD:227863	39/175 (22%)
		Homeobox	196..249	CDD:395001	34/52 (65%)
		DUF4074	379..442	CDD:404218

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910