Protein Alignment exex and Hoxa4

DIOPT Version :9

• Sequence 1: NP_648164.1
• Gene: exex / 38884
• FlyBaseID: FBgn0041156
• Length: 525
• Species: Drosophila melanogaster
• Sequence 2: NP_077326.1
• Gene: Hoxa4 / 100912525
• RGDID: 2814
• Length: 285
• Species: Rattus norvegicus
• Alignment Length: 369
• Identity: 97/369 - (26%)
• Similarity: 120/369 - (32%)
• Gaps: 151/369 - (40%)

  Fly   142 YVE-GFPP-PHHVPHPHPALGTYPLPRLPLMLPANPPGVPSGAAAPPPVSPQPAANHLSHSGATM 204
            |:| .||| ....||..|..|...:        ...||.|...::|...:|.|      |  |..
  Rat    12 YIEPKFPPFEEFAPHGGPGGGDGGV--------GGGPGYPRPQSSPHLPAPNP------H--AAR 60

  Fly   205 ATTTLLPPAQSQPKKSFCIDALLAKSQHQSGEPQPIIVDDRLAALHYARDQAELNHAFVTASNAA 269
            .|.....|...:|            |.|....|.|                            ||
  Rat    61 QTPAYYAPRAREP------------SYHGGLYPAP----------------------------AA 85

  Fly   270 AAAQAAASAAGGISEQEALQRIRDSREYDSPSPDGMSRSESPTSSHRSSPPISPGCEDQQQPHGA 334
            |...|...|:....||             ||:|          .:|.|..|         ||
  Rat    86 ACPYACRGASPARPEQ-------------SPAP----------GAHPSPAP---------QP--- 115

  Fly   335 LHPQHLSMRMSDFHDEFKKPIPPH----SPIRPQDFPLYAGGH----PYQLLAQGGSAFHRPLDP 391
                               |.||.    .|..|   .:..||.    |..|..||      |..|
  Rat   116 -------------------PAPPRRCAPGPTTP---AVATGGSAPACPLLLADQG------PAGP 152

  Fly   392 SGK-PIPIPMGHNFMPSQLQFEFLARAGMLHHRIPELAAYPHHAILGKTRRPRTAFTSQQLLELE 455
            .|| |:..|.......|.:...:..                     |:.:|.|||:|.||:||||
  Rat   153 KGKEPVVYPWMKKIHVSAVNPSYNG---------------------GEPKRSRTAYTRQQVLELE 196

  Fly   456 KQFKQNKYLSRPKRFEVASGLMLSETQVKIWFQNRRMKWKRSKK 499
            |:|..|:||:|.:|.|:|..|.|||.||||||||||||||:..|
  Rat   197 KEFHFNRYLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKKDHK 240

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
exex	NP_648164.1	Homeobox	442..495	CDD:278475	35/52 (67%)
Hoxa4	NP_077326.1	Homeobox	183..236	CDD:278475	35/52 (67%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	2.000