DRSC/TRiP Functional Genomics Resources

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Protein Alignment exex and hoxa6

DIOPT Version :10

Sequence 1:NP_648164.1 Gene:exex / 38884 FlyBaseID:FBgn0041156 Length:525 Species:Drosophila melanogaster
Sequence 2:XP_002933441.2 Gene:hoxa6 / 100485428 XenbaseID:XB-GENE-481964 Length:237 Species:Xenopus tropicalis


Alignment Length:192 Identity:58/192 - (30%)
Similarity:88/192 - (45%) Gaps:29/192 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   353 KPIPPHSPIRPQDFPLYAGGHPYQLLAQGGSAFHRPLDPSGKPIPIPMGH--------NFMPSQL 409
            ||.|.....:..:..:...|:.|:   .|.|.|:...:.||.|......|        :|...|.
 Frog    50 KPYPSPCFYQQSNTLIACNGNSYE---YGASCFYSGKESSGSPSSYGTKHRGDSGEYLHFSADQQ 111

  Fly   410 QFEFLARAGMLHHRIPELAAY----------------PHHAILGKTRRPRTAFTSQQLLELEKQF 458
            |::..:..|.:.|..|....|                |.:...|  ||.|..:|..|.|||||:|
 Frog   112 QYKSASAQGKMLHEEPTDRKYSSPVYPWMQRVNSCTGPVYGAHG--RRGRQTYTRFQTLELEKEF 174

  Fly   459 KQNKYLSRPKRFEVASGLMLSETQVKIWFQNRRMKWKRSKKAQQEAKERAKANQQQQQQQQT 520
            ..|:||:|.:|.|:|:.|.|:|.|:||||||||||||:..|....:......::.:|:::.|
 Frog   175 HFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKESKLLLPSHPSDDPSEGKQEEKST 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
exexNP_648164.1 Homeodomain 440..496 CDD:459649 33/55 (60%)
hoxa6XP_002933441.2 Homeodomain 156..212 CDD:459649 33/55 (60%)

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