DRSC/TRiP Functional Genomics Resources

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Protein Alignment exex and hoxa2

DIOPT Version :9

Sequence 1:NP_648164.1 Gene:exex / 38884 FlyBaseID:FBgn0041156 Length:525 Species:Drosophila melanogaster
Sequence 2:XP_004915456.1 Gene:hoxa2 / 100038099 XenbaseID:XB-GENE-488087 Length:373 Species:Xenopus tropicalis


Alignment Length:245 Identity:77/245 - (31%)
Similarity:103/245 - (42%) Gaps:69/245 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   280 GGISEQEALQR-------IRDSREYDSPSPDGMSRSE-SPTSSHRSSPPISPGCEDQQQPHGALH 336
            |.|:.|.:|..       :.|:.:..|.....:|.|. .|....::.|.::||.          |
 Frog    10 GFINSQPSLAECLTSFPPVGDTFQSSSIKSSALSHSTLIPPPFEQTIPSLNPGS----------H 64

  Fly   337 PQHLSMRMSDFHDEFKKPIPPHSPIRPQDFPLYAGGHP--YQLLAQGGSAFHRPLDPSGKPIPIP 399
            |:|..              |.|||....|.|:.||..|  |..:.:         ..:.|..||.
 Frog    65 PRHSR--------------PKHSPNGHGDSPVPAGSLPPEYPWMKE---------KKASKKAPIA 106

  Fly   400 MGHNFMPSQLQFEFLARAGMLHHRIP-ELAAYPHHAIL-------GKTRRPRTAFTSQQLLELEK 456
                          .|.|.......| ..|...|..|:       |.:||.|||:|:.|||||||
 Frog   107 --------------AATAAAAASAAPATTACLSHKEIIEIQDNSSGGSRRLRTAYTNTQLLELEK 157

  Fly   457 QFKQNKYLSRPKRFEVASGLMLSETQVKIWFQNRRMKWKRSKKAQQEAKE 506
            :|..||||.||:|.|:|:.|.|:|.|||:||||||||.||    |.:.||
 Frog   158 EFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKR----QTQCKE 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
exexNP_648164.1 Homeobox 442..495 CDD:278475 35/52 (67%)
hoxa2XP_004915456.1 Homeobox 144..197 CDD:365835 35/52 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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