DRSC/TRiP Functional Genomics Resources

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Protein Alignment Srp9 and AT3G49100

DIOPT Version :9

Sequence 1:NP_648163.1 Gene:Srp9 / 38883 FlyBaseID:FBgn0035827 Length:77 Species:Drosophila melanogaster
Sequence 2:NP_001327913.1 Gene:AT3G49100 / 824071 AraportID:AT3G49100 Length:103 Species:Arabidopsis thaliana


Alignment Length:67 Identity:23/67 - (34%)
Similarity:45/67 - (67%) Gaps:0/67 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVFVKNWDDFEIAVENMYLANPQNCRLTMKYAHSKGHILLKMTDNVKCVQYKAENMPDLRKIEKI 65
            ||::.:||:|......::.|:|::.|..|||.|..|.::||:|||.:|:::|.:...:.:|:||:
plant     1 MVYIASWDEFVDRSVQLFRADPESTRYVMKYRHCDGKLVLKVTDNKECLKFKTDQAQEAKKMEKL 65

  Fly    66 TS 67
            .:
plant    66 NN 67

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Srp9NP_648163.1 SRP9-21 4..73 CDD:283207 21/64 (33%)
AT3G49100NP_001327913.1 SRP9-21 4..67 CDD:398894 21/62 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 56 1.000 Domainoid score I4081
eggNOG 1 0.900 - - E1_KOG3465
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2536
OMA 1 1.010 - - QHG54656
OrthoDB 1 1.010 - - D1623953at2759
OrthoFinder 1 1.000 - - FOG0006630
OrthoInspector 1 1.000 - - oto3210
orthoMCL 1 0.900 - - OOG6_104467
Panther 1 1.100 - - LDO PTHR12834
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4865
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

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