DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8281 and CG13204

DIOPT Version :10

Sequence 1:NP_648161.1 Gene:CG8281 / 38880 FlyBaseID:FBgn0035824 Length:348 Species:Drosophila melanogaster
Sequence 2:NP_610678.1 Gene:CG13204 / 36227 FlyBaseID:FBgn0033627 Length:605 Species:Drosophila melanogaster


Alignment Length:235 Identity:56/235 - (23%)
Similarity:86/235 - (36%) Gaps:71/235 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 FIQTYRDLPVLWDTSLRDYTNREKRAEAYLRLVPIYHYLKRDATVEDVKKKINTLRTNYRKELKV 90
            ||:..:...|:::....||.|.|.:.:.:.::..     :...:||..|:|...||.:|.|.|: 
  Fly    23 FIEIVKKYDVVYNNHNPDYKNVEVKLKVWTQIAD-----EIGLSVEASKRKWKNLRDSYTKYLR- 81

  Fly    91 VESALRSGSLHSPR--CWTFQE-LDFL-------RNSEKFLA-VNPAFKNEPNFAF--------- 135
               :.|.|:..|.:  .|...: :|||       |||..... .|.....|.:|.:         
  Fly    82 ---SFRVGTKTSKKYQYWAHADHMDFLKPFQGPGRNSANGNGKSNDEDDTECDFGYQVLAKAASN 143

  Fly   136 -GE----------SSNCPSA---FLESQGAALHYPAPRAGGQTPNISEMFHKSFGAPPPPPPATN 186
             ||          |:.|.|.   .:.:...||  .:..|.|.|        .|.||..||    |
  Fly   144 GGEDELKITIATASAGCSSMGTHTVNTYTTAL--SSTSASGIT--------SSLGATTPP----N 194

  Fly   187 HVDYGSSKRARQTPPCTGAGAGSTG--------GPGATGT 218
            .:..||:...      ||.|:||.|        ...|||:
  Fly   195 MISPGSNLGG------TGGGSGSVGPQIHNSNSNGSATGS 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8281NP_648161.1 MADF_DNA_bdg 26..114 CDD:463144 21/90 (23%)
CG13204NP_610678.1 MADF 22..108 CDD:214738 23/93 (25%)
BESS 478..510 CDD:460758
Blue background indicates that the domain is not in the aligned region.

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