DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8281 and CG5953

DIOPT Version :10

Sequence 1:NP_648161.1 Gene:CG8281 / 38880 FlyBaseID:FBgn0035824 Length:348 Species:Drosophila melanogaster
Sequence 2:NP_609796.1 Gene:CG5953 / 34985 FlyBaseID:FBgn0032587 Length:701 Species:Drosophila melanogaster


Alignment Length:490 Identity:100/490 - (20%)
Similarity:153/490 - (31%) Gaps:181/490 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KVMSGAEENRHYLRAFIQTYRDLPVLWDTSLRDYTNREKRAEAYLRLVPIYHYLKRDATVEDVKK 75
            |:|....::...|   |:.||....||:.:...|.::..|..|:..:...:...|     .:|::
  Fly    74 KIMEWTNDDALEL---IEQYRCHTELWNRADPKYKDKLCRFRAWSEIAERFGCSK-----AEVER 130

  Fly    76 KINTLRTNYRKELKVVESALRSGSLHSPRCW-TFQELDFLRNSEKFLAVNPAFKNEPNFAFGESS 139
            |:|.|.|.||:|...:...:..|...:|..| .|:..||:......|:...:..:..|.|.|  :
  Fly   131 KMNVLLTQYRREKHKMFVKIYQGIQPNPSKWYAFKRFDFMEAGGGSLSGGGSVGSGVNAASG--N 193

  Fly   140 NCPSAFLESQGAALH-----------------YPAPRAGGQTPNI---------SEMFH------ 172
            ..|:....|..||.|                 ..|...||..|.:         :.|.|      
  Fly   194 LVPNPVSSSAAAAAHNGLNGLAAAAAAYESGTIAAAGNGGAPPTVPGGGAPGSQTVMQHRRIKTK 258

  Fly   173 --KSFGA-------------------------PP--------------------PPP------PA 184
              |.|||                         ||                    ||.      |.
  Fly   259 ELKYFGAMGLNIPMLIASSQTLDSWNTAGQYSPPISGSGGGGSERGGSAGGGGVPPQQLRVPLPM 323

  Fly   185 TNHVDYG---SSKRARQTPPCT---------------------------------GAGAGSTGGP 213
            :.|...|   ||...:|:|..|                                 .||||..||.
  Fly   324 SYHGGAGGGSSSSDFQQSPLKTMDTSDNEDNNNTKEDVAAAAALGQLAAKVELRSPAGAGPGGGG 388

  Fly   214 GATGTAHN--------TDELLNIACEYLAGTYPEEESIARTWTHK-----LKRLPREQRLLAERF 265
            |::....|        .|..|:     .||:.|    |..|..|:     |...|...|.:..|.
  Fly   389 GSSSREANDPTSDPIKPDRTLS-----EAGSSP----IPNTNMHEAHKNHLLNSPAGGRSVTPRQ 444

  Fly   266 INEIL---------FEAESNNLHRGSVQI-NNSFEPYVRYEETPNGHEEQDKSQSPSVHTSSESK 320
            .:|.|         .:.:...|.:...|: ....:.:.:.::..:||||.|..|....:...:: 
  Fly   445 AHEQLHHHPHTQHHLQQQQQQLQQQHQQLQQQQLQQHQQQQQLHHGHEELDIKQELVDYFHGQA- 508

  Fly   321 PNVSGASGSGGGGG---------PPGS--TTTSAG 344
                 |.|.|||||         ||.|  :.:|||
  Fly   509 -----AGGGGGGGGGVVGPAPPPPPESHRSYSSAG 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8281NP_648161.1 MADF_DNA_bdg 26..114 CDD:463144 22/88 (25%)
CG5953NP_609796.1 MADF 85..171 CDD:214738 24/93 (26%)

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