DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8281 and CG4404

DIOPT Version :10

Sequence 1:NP_648161.1 Gene:CG8281 / 38880 FlyBaseID:FBgn0035824 Length:348 Species:Drosophila melanogaster
Sequence 2:NP_572838.2 Gene:CG4404 / 32241 FlyBaseID:FBgn0030432 Length:308 Species:Drosophila melanogaster


Alignment Length:318 Identity:59/318 - (18%)
Similarity:113/318 - (35%) Gaps:76/318 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 FIQTYRDLPVLWDTSLRDYTNREKRAEAYLRLVPIYHYLKRDATVEDVKKKINTLRTNYRKELKV 90
            |:|...:.|.||:.:...|:.:|....|:.:   :.:.:|  .||.:.:::..|:|:::.:.||:
  Fly    18 FVQFVENQPCLWNYTHPGYSKKEDVQRAWQQ---VANDIK--DTVRNCRERWRTIRSSFLRSLKL 77

  Fly    91 VESALRSGSLHSPRCWTFQELDFLRNSEKFLAVNPAFKNEPNFAFGESSNCPSAFLESQGAALHY 155
            ..:....|   ..:.:..:.|.||   ..|.......|..|.....:.....:|..|.:..|...
  Fly    78 ARTQTGRG---KRKYYLSKYLQFL---VPFTKSRSCHKQLPGMVLRKPGQAATAQQEDEVVAAEE 136

  Fly   156 PAPRAGGQTP---NISEMFHKSFGAPPPPPPATNHVDYGSSKRARQTPPCTGAGAGSTGGPGATG 217
            .|..:.|:.|   .:||..|:.                 :.::.|:.|                 
  Fly   137 EAKVSDGEMPLDVQVSEEEHRR-----------------NQEQDREQP----------------- 167

  Fly   218 TAHNTDELLNIACEYLAGTYPEEESIARTWTHKLKRLPREQRLLAERFINEILFEAESNNLHRGS 282
            ||.....|.:|..|:       :.|.|   ..:|:|:..:|.|::        ..|.:...|.|.
  Fly   168 TACLPLRLHSIKVEH-------DSSNA---NQQLERMVSQQSLVS--------VPAAALGNHLGW 214

  Fly   283 VQINNSFEPYVRYEETPNGHEEQDKSQSPSVHTSSESKPNVSGAS----GSGGGGGPP 336
            ..:...|:.:      .:||.:...:.:.........:|..|..|    |.||||..|
  Fly   215 SDLTQWFKGH------GSGHHKLTTTTTTPTSPPPPPQPATSALSVFTGGPGGGGSQP 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8281NP_648161.1 MADF_DNA_bdg 26..114 CDD:463144 17/87 (20%)
CG4404NP_572838.2 MADF 17..103 CDD:214738 20/95 (21%)
BESS 267..301 CDD:460758 59/318 (19%)

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