DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8281 and CG4004

DIOPT Version :10

Sequence 1:NP_648161.1 Gene:CG8281 / 38880 FlyBaseID:FBgn0035824 Length:348 Species:Drosophila melanogaster
Sequence 2:NP_727638.2 Gene:CG4004 / 32226 FlyBaseID:FBgn0030418 Length:359 Species:Drosophila melanogaster


Alignment Length:380 Identity:87/380 - (22%)
Similarity:125/380 - (32%) Gaps:149/380 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 YLRAFIQTYRDLPVLWDTSLRDYTNREKRAEAYLRLVPIYHYLKRDATVEDVKKKINTLRTNYRK 86
            :.:.|:..||.:|.||....:.|.:|:.:.|:|.||:.:.......|.:..:|:|||..||:||:
  Fly    10 FWKKFLGLYRSMPELWLVRSKLYRDRQLKLESYSRLLELLRTTDSYANIHTLKRKINNFRTSYRR 74

  Fly    87 ELKVVESALRSGSLHSPRCWTFQELDFL---------------------RNSEKFLAVNPAFKNE 130
            ||:.|   |.||:.:.|..|.|:|||||                     |||:       ..:||
  Fly    75 ELRKV---LDSGNTYKPTLWYFKELDFLYELETGELQLEGIVAADRDLVRNSK-------VLQNE 129

  Fly   131 PN--FAFGESSNCPSAFLESQGAALHYPAPRAGGQTPNISE-----------MFHKSF------- 175
            .|  ..||       |.|..|..::.:...|......||:|           :...:|       
  Fly   130 SNKTITFG-------AQLAEQEVSMSFIVKREIEVDENITEDMQQLETEDVDIMSDAFPHEEDML 187

  Fly   176 -------GAPPPPPPATN---------HVD-------YGSSKR----------------ARQTPP 201
                   |...|.|...|         |||       .||.|.                ..||..
  Fly   188 RLDAVGDGDVEPEPEPDNDPELDNMDDHVDDYRNNSSAGSIKNNGYQQHTVSSHQQHNGESQTSD 252

  Fly   202 CTGAGAGSTGGPGATGT-------------------------------AHNTDELLNIACEYLAG 235
            .:|....:.....:..|                               .|.:|.      ||   
  Fly   253 KSGRRIRNRRRRSSNDTDYVEAARKRRNVETSNRDRDWHRERDRERDRKHESDS------EY--- 308

  Fly   236 TYPEEESIARTWTHKLKRLPREQRLLAERFINEILFEAESNNLHRGSVQINNSFE 290
               |.|.|.:......:|:..:|||.|||.|:|:|.....|.|         |||
  Fly   309 ---ECELIGKRMASHFRRMRPDQRLFAERIISEVLVYGRMNRL---------SFE 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8281NP_648161.1 MADF_DNA_bdg 26..114 CDD:463144 33/87 (38%)
CG4004NP_727638.2 MADF_DNA_bdg 14..99 CDD:463144 33/87 (38%)

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