DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pbl and Ect2

DIOPT Version :9

Sequence 1:NP_523965.2 Gene:pbl / 38879 FlyBaseID:FBgn0003041 Length:1311 Species:Drosophila melanogaster
Sequence 2:NP_001102017.2 Gene:Ect2 / 361921 RGDID:1308524 Length:913 Species:Rattus norvegicus


Alignment Length:1319 Identity:326/1319 - (24%)
Similarity:486/1319 - (36%) Gaps:535/1319 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEMETIEEQSKCE--------MSITTLPTRICLVGGVGQDADTLQAAESFGLPIVTSDTGLDILG 57
            ||:..|:.:..|.        .||..:..::..|        .:.:.|.||        .||   
  Rat    75 MEVPVIKIKESCPGKSDEKLIKSIINMEIKVPCV--------KMDSMEEFG--------SLD--- 120

  Fly    58 ESSDWRTFYVLDDFEGASFEAIHKQKECILGPPALKYAAEMKQTLGQNSRPIYNYAMRGVVTCFT 122
             |.::...:|:.||:.:.|..::|....|:|||.:...|:|.:.|..:.||:|..:|..:|.|||
  Rat   121 -SPEFENIFVVTDFQTSVFNDLYKADCRIVGPPVILNCAQMGEPLPFSCRPLYCTSMLNLVLCFT 184

  Fly   123 GIRKKDELTKLVNLIHSMGGCIKKDLNTKTTHLICNHSGGEKYQYAKTFRLTVVRPAWVFAAWAD 187
            |.|||:||.|||.|:|.|||.|:|:.|:|.|||:.|.:.|||::.|.:....::||.|::.||..
  Rat   185 GFRKKEELVKLVTLVHHMGGVIRKECNSKVTHLVANCTQGEKFRVAVSLGTPIMRPGWIYEAWER 249

  Fly   188 RNSLEFDATQENFTKTHRLKAFEGQKICFFGFPVEEHQHMVDVLLENGGVCAELDDPECSHVVMP 252
            ||...|.|..::|....::..|:...:.|.||..||...|.::....||....:.|..|:|::: 
  Rat   250 RNEQCFCAADDDFRNEFKVPPFQDCILSFLGFSDEEKHSMEEMTEMQGGTYLPVGDERCTHLIV- 313

  Fly   253 NTGAVFTSTSTSTDTNPSTLINPPESQVPGSSSASQAGEEEQRKAEHLEQAEIKKMEYSHAETDN 317
                                                                             
  Rat   314 ----------------------------------------------------------------- 313

  Fly   318 GMSLDIDQEQKENQGIEDEDDIHFDERLFVEAADIINHGEDQLPESDEEDLEEEQKPKVEEVLKE 382
                                                          ||..::|            
  Rat   314 ----------------------------------------------DENTVKE------------ 320

  Fly   383 QEVEEDVQASTPKTSKIRTSLKAATPLSSPEMDGIALDFESTTQNISPILKAIDECDLETDDLPP 447
                                                |.||                        |
  Rat   321 ------------------------------------LPFE------------------------P 325

  Fly   448 SENDLKRKRESFDNVSLMSVDSFALPASTKKPKLIRTGSISRTLRRSVSFVAEPLMKTLRPRRSS 512
            |                                                                
  Rat   326 S---------------------------------------------------------------- 326

  Fly   513 VADASSFVGSEAADNSICSLASSINLTLNDSIRKPVKEKLRSFCGRITRSSSRRHDRGVDGTPEC 577
                                                                             
  Rat   327 ----------------------------------------------------------------- 326

  Fly   578 TTLLDSGFKTPKAPKLRSTATPKTAKRLFGPVSGVVSALTLTNPSTPTPNPNPNTNCTATLDVND 642
                                     |:||                                    
  Rat   327 -------------------------KKLF------------------------------------ 330

  Fly   643 TSIHTFAFCAAAVTPAMPPSSSSSSSSPILSTSIAVHSSVQVIKSPEESTTRRNSPAPIEEPMAM 707
                                                                             
  Rat   331 ----------------------------------------------------------------- 330

  Fly   708 VVDEHTTLTKPEPKNNHTHILKSDWFWYTIQNGYANEMDYLFGD--YLDSITNTPNTDRRDSLPI 770
                               ::|.:|||.:||      ||...|:  ||....|||...:..|| :
  Rat   331 -------------------VVKQEWFWGSIQ------MDARAGETMYLYEKANTPELKKSVSL-L 369

  Fly   771 SF----NKRKRKRFSQRI-----QLEGTPLGSGKRRS---SVSDAGLLSVSNSLFDCTTSPDKL- 822
            |.    :.|||:|..:.:     :.:.:|....||.|   |:|...||.:||       :||.. 
  Rat   370 SLSTPNSNRKRRRLKESLAQLSRETDLSPFPPRKRPSAEHSLSIGSLLDISN-------TPDSSI 427

  Fly   823 ---ESDKLLHAEPEASDATPAKKSMRFNHFMDFYTTESNYVGILDTILNLFKNKLEELAETNDPL 884
               |:.|.......:|...|.|:|.|:....:.|.||||||.||.||:.||:..|||..:...|:
  Rat   428 HYGETPKSCAKSSRSSTPVPPKQSARWQVAKELYQTESNYVNILATIIQLFQVPLEEEGQRGGPI 492

  Fly   885 LNKSEIKTIFGNFLPIHEVHQSMLEHLRKLHANWREDCLIGDIIIQHRDELIKAYPPYVNFFEQM 949
            |...|||||||:...|.:||..:.:.|..|.|||.|...||||.:::..:|:|.|||:|||||..
  Rat   493 LAPEEIKTIFGSIPDIFDVHMKIKDDLEDLIANWDESRSIGDIFLKYSKDLVKTYPPFVNFFEMS 557

  Fly   950 KEQLQYCDREYPRFHAFLKINQTKPECGRQGLQDLMIRPVQRLPSISLLLNDILKHTTSGNADHG 1014
            ||.:..|:::.|||||||||||.|||||||.|.:|:|||||||||::|||||:.|||...|.|..
  Rat   558 KEMIIKCEKQKPRFHAFLKINQAKPECGRQSLVELLIRPVQRLPSVALLLNDLKKHTADENPDKS 622

  Fly  1015 RLEEALKAIKQVTLHINEDKRRTESRMAIFDIFNDIEGCPAHLVSSNRSFILKCEVNELSDSLSG 1079
            .||:|:.::|:|..|||||||:||::..|||:..:::||||:|:||:||.|.:.|...|.:....
  Rat   623 TLEKAIGSLKEVMTHINEDKRKTEAQKQIFDVVYEVDGCPANLLSSHRSLIQRVETVSLGEHPCD 687

  Fly  1080 RGDSLVLYLFSDSIELCKRRSKGFNTAKSPSTAKTH-----KHLKLISLNTIRLVIDI---SDSP 1136
            ||:.:.|:||:|.:|:.::|.|...|.:||.. :|.     ||:.|:.|:.|:.|:||   .|..
  Rat   688 RGEQVTLFLFNDCLEIARKRHKVIGTFRSPHD-RTRPPASLKHIHLMPLSQIKKVLDIRETEDCH 751

  Fly  1137 RAFGLLLRGDKEK---LYTFTISDEETDKSVYVKKLCNQIAAHTCRTDADKLLICRTSQELEVDI 1198
            .||.||:|...|:   |.:|.::.||..|..::|.||..:|...|:.||:.|:.....:..||:.
  Rat   752 NAFALLVRPPTEQANVLLSFQMTSEELPKESWLKMLCRHVANTICKADAENLMYVTDPESFEVNT 816

  Fly  1199 SDVNVSTLSKAFKLAAKTRLKVGRAFSFNKTPNKLKRAVSTMMTSPFGSTNSLTPAS-QLAQMRL 1262
            .|:: ||||:|.:...||..||.|||||:|||   |||:...::|...|.....|:| :||..||
  Rat   817 KDMD-STLSRASRAIKKTSKKVTRAFSFSKTP---KRALRMALSSSHSSEGRSPPSSGKLAVSRL 877

  Fly  1263 ASCTNINEVDDEDCASMRS 1281
            :|.:::..:......|:.|
  Rat   878 SSTSSLAGIPSPSLVSLPS 896

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pblNP_523965.2 PTCB-BRCT 117..180 CDD:289507 32/62 (52%)
RhoGEF 852..1032 CDD:279015 97/179 (54%)
PH_Ect2 1023..1186 CDD:269936 66/173 (38%)
Ect2NP_001102017.2 PTCB-BRCT 179..242 CDD:289507 32/62 (52%)
BRCT 266..341 CDD:278934 27/532 (5%)
RhoGEF 456..640 CDD:279015 97/183 (53%)
PH_Ect2 631..804 CDD:269936 66/173 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166344449
Domainoid 1 1.000 193 1.000 Domainoid score I3107
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7298
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D305707at33208
OrthoFinder 1 1.000 - - FOG0007255
OrthoInspector 1 1.000 - - oto95738
orthoMCL 1 0.900 - - OOG6_104055
Panther 1 1.100 - - LDO PTHR16777
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5358
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.850

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