DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eIF4E5 and eif4e3

DIOPT Version :9

Sequence 1:NP_648160.2 Gene:eIF4E5 / 38878 FlyBaseID:FBgn0035823 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_001004589.1 Gene:eif4e3 / 447850 ZFINID:ZDB-GENE-040912-156 Length:224 Species:Danio rerio


Alignment Length:215 Identity:58/215 - (26%)
Similarity:103/215 - (47%) Gaps:28/215 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 QLNSIHKHHHHHEGVPLESNSPE-PIDEEIYQVEYKH-------PLEHVWTLWY---LENDRTKH 73
            |||:.      .:..|:.|...: .|||...:....|       ||...||.|.   |.......
Zfish    10 QLNTA------RQSSPVNSTENDIHIDERELENITNHVEDGTSLPLHSPWTFWLDRSLPGTTAAE 68

  Fly    74 WKDMLNEITEIDSVETFWSLYHTIKTPAELKIGCDYSVFKKGIKPMWEDEANIKGGRWLVTVSKS 138
            .:..|.:|..:.:|::|||:|:.|...:.|.:.|.|.:.:...:|:||:|:|.|||.|.:.|.|.
Zfish    69 CESNLKKIYTVHTVQSFWSVYNNIPPVSCLPLRCSYHLMRGERRPLWEEESNAKGGVWKMKVPKE 133

  Fly   139 AKAELDQIWLDILLLMVGQNF-EY---SDEICGAVINIRNKSNKISVWTANGS--NEMAILEIGQ 197
            :..   .:|.::||..:|:.| :|   .||:.|..:::|.:.:.:.||..|.|  ||..:|  |:
Zfish   134 STL---AVWKELLLATIGEQFTDYCASEDEVVGVSVSVREREDVVQVWNGNASFANEANVL--GR 193

  Fly   198 KLKILLHLQSHSLQYQLHSD 217
            ..::|..:...::.|:.|.:
Zfish   194 IYELLPQISFKAVFYKPHEE 213

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
eIF4E5NP_648160.2 IF4E 59..212 CDD:279921 45/161 (28%)
eif4e3NP_001004589.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 4/18 (22%)
IF4E 51..198 CDD:279921 44/151 (29%)