DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32369 and AT1G18660

DIOPT Version :10

Sequence 1:NP_729296.1 Gene:CG32369 / 38873 FlyBaseID:FBgn0052369 Length:1066 Species:Drosophila melanogaster
Sequence 2:NP_001319035.1 Gene:AT1G18660 / 838447 AraportID:AT1G18660 Length:491 Species:Arabidopsis thaliana


Alignment Length:368 Identity:98/368 - (26%)
Similarity:159/368 - (43%) Gaps:72/368 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   647 FAGVLDRTQQELQRLKKLDKSAPSLAVSSVAGQLIDASDFDCVVCSRTLWKPVVTPCGHTYCLVC 711
            |:|.|....||      |:|..|: ::....|....:.||||.||.:.|::|..||||||:|..|
plant   162 FSGPLRSNLQE------LEKVMPN-SMRKTHGMAERSDDFDCTVCLKLLYEPATTPCGHTFCRSC 219

  Fly   712 LDRCMDYNSPCPLCMSPLVEFNVNASASTSASQHPNPNQNQIHLHPGSSSPVPFALAKRPVTKFL 776
            |.:.||..:.||||                        :..|.:.|.:.:          |:..|
plant   220 LFQSMDRGNKCPLC------------------------RTVIFMTPRTCA----------VSVTL 250

  Fly   777 EAAMKRFIPDHYEARFRQEIDQ-----EPSVPVFICTAAFPAVPCPLFVCEPRYRLMVRRAVESG 836
            ...:::..|:.|..| :.|.|.     ..|:|:|:.....|.....|.:.||||||||||.:| |
plant   251 NNIIEKNFPEEYAER-KSEQDTLVHLGNESMPLFVMDVIIPCQKLSLHIFEPRYRLMVRRIME-G 313

  Fly   837 DKTFGIVQPNGGKSRYYDVGTILDIRDCVQLGDGCSILSTIGCKRFKILARNEKDGYETAKVEYI 901
            :...|:|..:.......||...::|.:|..|.||..:|.....:|.:|:...::|||..|:||::
plant   314 NHRMGMVALDSATGSPVDVACEVEITECDPLPDGRFVLELESHRRCRIVKAWDQDGYRVAEVEWV 378

  Fly   902 CDEPIADEQVKILAGMQGVVLAKAS---EWFESL------STEQKHEILQSFGQMPPLEPNWELI 957
            .|.|...||.|  |.::.:..:.||   .|.:..      ...::.|||.:...|.|..      
plant   379 KDIPPQSEQGK--ADLRELTTSAASFARSWLDRAKEAARQGDRRRLEILLNVESMIPTP------ 435

  Fly   958 SDGPAWAWWIIALLPLSQQLKVDILATTSLEKRLRAIDKTLDW 1000
            .|...:::|:..|.......::::|       ||:...:.||:
plant   436 QDPERFSFWLATLTDRRPSERLELL-------RLQDTGEVLDY 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32369NP_729296.1 RING_Ubox 179..222 CDD:473075
TPR repeat 350..378 CDD:276809
TPR 357..>438 CDD:440225
Spy 363..>517 CDD:443119
TPR repeat 383..413 CDD:276809
RING-HC_LONFs_rpt2 685..729 CDD:438177 23/43 (53%)
LON/PUA 811..999 CDD:442054 52/196 (27%)
AT1G18660NP_001319035.1 TPR repeat 42..67 CDD:276809
TPR <54..>173 CDD:440225 5/16 (31%)
TPR repeat 72..125 CDD:276809
TPR repeat 130..158 CDD:276809
RING-HC_LONFs_rpt2 193..237 CDD:438177 23/67 (34%)
LON/PUA 278..479 CDD:442054 57/210 (27%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.