DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32369 and lonrf1

DIOPT Version :9

Sequence 1:NP_001246660.1 Gene:CG32369 / 38873 FlyBaseID:FBgn0052369 Length:1066 Species:Drosophila melanogaster
Sequence 2:XP_021329987.1 Gene:lonrf1 / 560773 ZFINID:ZDB-GENE-101021-4 Length:608 Species:Danio rerio


Alignment Length:859 Identity:192/859 - (22%)
Similarity:317/859 - (36%) Gaps:298/859 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 DPLMCPLCSDILRCPVTTNCGHTFCRQCCETI--TQCNICQVRFPRIQASSPGPPVCALTTTTAS 241
            |.|.||:|..::..|:|.:|||:|||:|....  ::|..|:.|..:..|                
Zfish     7 DLLECPICLFLMCEPMTMSCGHSFCRRCMGAFLPSRCPTCKERLKQRDA---------------- 55

  Fly   242 GAGSSLFTAPSNHNANLSLISFPVGYGVQLSSSVQRLAAPPMTVTTTTVASTTATATTTMASTSA 306
                      .|...|:.|.|                                            
Zfish    56 ----------KNIKNNVLLFS-------------------------------------------- 66

  Fly   307 AAALGLSAYPSAHGGGIGSTAMKFMPDVLVRRLVEKWWGPDLQAK-KISEKASSCMHLNLLDDAL 370
                                            ::||....:.:.| .|.||    :..:...:||
Zfish    67 --------------------------------IIEKCCPEETKMKCHIQEK----LKTSEFTEAL 95

  Fly   371 KFCNASLEKSPANFKSLCLRAEVLLKLSHYQSSLADIENALRTRCTSPKAHYLRALALSGLGRLE 435
            :..:..:|.:|.:......|||..:.|..:..:|.|:::....|....:..:.:...|..:||..
Zfish    96 RIADEGIEMAPDDVSLKVWRAEACMGLRRFSDALRDLDDLCFVRPNWTEGFFRKGNVLLEMGRQT 160

  Fly   436 EALYNGFLAICLDKKTNLSNSEIFQHDLAKILQRLLAHMPKNRTSLSSATVPVFQQQHRNFATSR 500
            |||.                          :..|.|                   :||.:||.::
Zfish   161 EALI--------------------------LFYRCL-------------------KQHPDFAPAK 180

  Fly   501 APYPLLWEQVRRRRKQQHHHHHHHHHHHVHLDDVEDEFGHYNNYIMAGDDMEEEVEVEVEGGEPG 565
                   .|:::                                |:..:.|....||      |.
Zfish   181 -------NQIKK--------------------------------ILEAEGMAVPEEV------PR 200

  Fly   566 SLHLDGDFL----------FPSALDFMDHHRHQRHVFEQKQFDLQPRRHANRKHCKRKWSVAMES 620
            .||:..:||          .||..|      .||:            .|.|.:            
Zfish   201 ILHVVSEFLQDPCPITSSVSPSCTD------AQRY------------SHTNAE------------ 235

  Fly   621 MGGKDLEEEDVDRAHAAGESQRCSRLFAGVL------DRTQQELQRLKKLDKSAPSLAVSSVAGQ 679
              |:....:::.:......|:.|..|...|.      |..:..::|.:|.::...|:...|.. .
Zfish   236 --GQSDSGQNITKMKLGSSSECCLSLCQAVSFLPTAEDDEELMMKREEKHNRGVCSVGRESCL-S 297

  Fly   680 LIDASDFDCVVCSRTLWKPVVTPCGHTYCLVCLDRCMDYNSPCPLCMSPLVEFNVNASASTSASQ 744
            ::..|||:|.:|.|..::||.||||||:|..|::|.:|:|..||||..||.|:..|        :
Zfish   298 VLTVSDFECPLCIRLFYEPVTTPCGHTFCKNCIERSLDHNLRCPLCKQPLQEYFKN--------R 354

  Fly   745 HPNPNQNQIHLHPGSSSPVPFALAKRPVTKFLEAAMKRFIPDH-------YEARFRQEIDQEPSV 802
            ..||                        |..|:..|.|..|..       :||...:..:....:
Zfish   355 KYNP------------------------TVLLQEIMSRLFPQQLAERKQVHEAEMAELSNLTKDI 395

  Fly   803 PVFICTAAFPAVPCPLFVCEPRYRLMVRRAVESGDKTFGIVQPNGGKSR-----------YYDVG 856
            |:|:||.|:|.:||||.:.|||||||:||.:|:|.|.||:.....||..           :.|.|
Zfish   396 PIFVCTVAYPGIPCPLHIFEPRYRLMMRRCMETGTKKFGMCSYEHGKGEKHERMFCIRLSFADYG 460

  Fly   857 TILDIRDCVQLGDGCSILSTIGCKRFKILARNEKDGYETAKVEYICDEPIADEQVKILAGMQGVV 921
            .:|||.|...|.||.|.:.|:|..||::|.|.::|||.||.:||:.|..:...:::||..:...|
Zfish   461 CMLDILDLDLLPDGRSYVETLGGSRFRVLRRGQRDGYHTADIEYLEDHKVEGAELEILQRLHDSV 525

  Fly   922 LAKASEWFESLSTEQKHEILQSFGQMPPLEPNWELISDGPAWAWWIIALLPLSQQLKVDILATTS 986
            ..:|.||:..|::..:.:|.:.:|.||..|.|.:..::||||.||::::|.|....:..:|:.||
Zfish   526 YQQAREWYLRLNSRIQDQISRQYGIMPEKEDNIQASANGPAWCWWLLSVLQLDPSYQTTVLSLTS 590

  Fly   987 LEKRLRAIDKTLDW 1000
            |:.||..:...|::
Zfish   591 LKDRLGHLRIVLEY 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32369NP_001246660.1 RING 183..>206 CDD:302633 11/22 (50%)
TPR_11 349..412 CDD:290150 14/63 (22%)
TPR repeat 350..378 CDD:276809 6/28 (21%)
TPR_11 383..449 CDD:290150 13/65 (20%)
TPR repeat 383..413 CDD:276809 6/29 (21%)
RING 687..729 CDD:238093 20/41 (49%)
LON 791..1005 CDD:271862 78/221 (35%)
LON_substr_bdg 802..1001 CDD:280370 78/210 (37%)
lonrf1XP_021329987.1 RING_Ubox 9..47 CDD:327409 14/37 (38%)
TPR repeat 108..138 CDD:276809 6/29 (21%)
TPR repeat 143..171 CDD:276809 8/72 (11%)
RING2-HC_LONFs 303..344 CDD:319428 21/40 (53%)
RING-HC finger (C3HC4-type) 306..343 CDD:319428 18/36 (50%)
LON_substr_bdg 385..603 CDD:327563 77/217 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579763
Domainoid 1 1.000 172 1.000 Domainoid score I3668
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 297 1.000 Inparanoid score I2704
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D207900at33208
OrthoFinder 1 1.000 - - FOG0001000
OrthoInspector 1 1.000 - - otm25890
orthoMCL 1 0.900 - - OOG6_101814
Panther 1 1.100 - - O PTHR23327
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X746
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1110.900

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