Sequence 1: | NP_001246660.1 | Gene: | CG32369 / 38873 | FlyBaseID: | FBgn0052369 | Length: | 1066 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021329987.1 | Gene: | lonrf1 / 560773 | ZFINID: | ZDB-GENE-101021-4 | Length: | 608 | Species: | Danio rerio |
Alignment Length: | 859 | Identity: | 192/859 - (22%) |
---|---|---|---|
Similarity: | 317/859 - (36%) | Gaps: | 298/859 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 179 DPLMCPLCSDILRCPVTTNCGHTFCRQCCETI--TQCNICQVRFPRIQASSPGPPVCALTTTTAS 241
Fly 242 GAGSSLFTAPSNHNANLSLISFPVGYGVQLSSSVQRLAAPPMTVTTTTVASTTATATTTMASTSA 306
Fly 307 AAALGLSAYPSAHGGGIGSTAMKFMPDVLVRRLVEKWWGPDLQAK-KISEKASSCMHLNLLDDAL 370
Fly 371 KFCNASLEKSPANFKSLCLRAEVLLKLSHYQSSLADIENALRTRCTSPKAHYLRALALSGLGRLE 435
Fly 436 EALYNGFLAICLDKKTNLSNSEIFQHDLAKILQRLLAHMPKNRTSLSSATVPVFQQQHRNFATSR 500
Fly 501 APYPLLWEQVRRRRKQQHHHHHHHHHHHVHLDDVEDEFGHYNNYIMAGDDMEEEVEVEVEGGEPG 565
Fly 566 SLHLDGDFL----------FPSALDFMDHHRHQRHVFEQKQFDLQPRRHANRKHCKRKWSVAMES 620
Fly 621 MGGKDLEEEDVDRAHAAGESQRCSRLFAGVL------DRTQQELQRLKKLDKSAPSLAVSSVAGQ 679
Fly 680 LIDASDFDCVVCSRTLWKPVVTPCGHTYCLVCLDRCMDYNSPCPLCMSPLVEFNVNASASTSASQ 744
Fly 745 HPNPNQNQIHLHPGSSSPVPFALAKRPVTKFLEAAMKRFIPDH-------YEARFRQEIDQEPSV 802
Fly 803 PVFICTAAFPAVPCPLFVCEPRYRLMVRRAVESGDKTFGIVQPNGGKSR-----------YYDVG 856
Fly 857 TILDIRDCVQLGDGCSILSTIGCKRFKILARNEKDGYETAKVEYICDEPIADEQVKILAGMQGVV 921
Fly 922 LAKASEWFESLSTEQKHEILQSFGQMPPLEPNWELISDGPAWAWWIIALLPLSQQLKVDILATTS 986
Fly 987 LEKRLRAIDKTLDW 1000 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG32369 | NP_001246660.1 | RING | 183..>206 | CDD:302633 | 11/22 (50%) |
TPR_11 | 349..412 | CDD:290150 | 14/63 (22%) | ||
TPR repeat | 350..378 | CDD:276809 | 6/28 (21%) | ||
TPR_11 | 383..449 | CDD:290150 | 13/65 (20%) | ||
TPR repeat | 383..413 | CDD:276809 | 6/29 (21%) | ||
RING | 687..729 | CDD:238093 | 20/41 (49%) | ||
LON | 791..1005 | CDD:271862 | 78/221 (35%) | ||
LON_substr_bdg | 802..1001 | CDD:280370 | 78/210 (37%) | ||
lonrf1 | XP_021329987.1 | RING_Ubox | 9..47 | CDD:327409 | 14/37 (38%) |
TPR repeat | 108..138 | CDD:276809 | 6/29 (21%) | ||
TPR repeat | 143..171 | CDD:276809 | 8/72 (11%) | ||
RING2-HC_LONFs | 303..344 | CDD:319428 | 21/40 (53%) | ||
RING-HC finger (C3HC4-type) | 306..343 | CDD:319428 | 18/36 (50%) | ||
LON_substr_bdg | 385..603 | CDD:327563 | 77/217 (35%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170579763 | |
Domainoid | 1 | 1.000 | 172 | 1.000 | Domainoid score | I3668 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 297 | 1.000 | Inparanoid score | I2704 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D207900at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001000 | |
OrthoInspector | 1 | 1.000 | - | - | otm25890 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101814 | |
Panther | 1 | 1.100 | - | - | O | PTHR23327 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X746 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
11 | 10.900 |