DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32369 and Bfar

DIOPT Version :9

Sequence 1:NP_001246660.1 Gene:CG32369 / 38873 FlyBaseID:FBgn0052369 Length:1066 Species:Drosophila melanogaster
Sequence 2:NP_001013143.1 Gene:Bfar / 304709 RGDID:1304791 Length:450 Species:Rattus norvegicus


Alignment Length:333 Identity:70/333 - (21%)
Similarity:110/333 - (33%) Gaps:99/333 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 MDEAGDSPLDMHSPTRE--LRVPSPLQDLEDFDPLMCPLCSDILRCPVTTNCGHTFCRQC----- 206
            |:|...:.|.|.....:  :|...|...:.:|.   |..|.|.|..|.|.||||:|||.|     
  Rat     1 MEEPQKNDLSMRGQEEDHPVRSSGPQISVSEFS---CHCCYDTLVNPTTLNCGHSFCRHCLALWW 62

  Fly   207 -CETITQCNICQVR---FPRIQASSPGPPVCALTTTTASGAGSSLFTAPSNHNANLSLISFPVGY 267
             ....|:|..|:.:   ||::             ......|...||.         ..|...|..
  Rat    63 MSSKKTECPECREKWEGFPKV-------------NILLRDAIEKLFP---------DAIKMRVED 105

  Fly   268 GVQLSSSVQRLAA--------PPMTVTTTTV--------ASTTATATTTMASTSAAAALGLSAY- 315
            ..|.:..||.|||        .|:..:|..|        .|...||.|       ..|:.|..| 
  Rat   106 IQQNNDVVQSLAAFQKYGNDQNPLAPSTGRVNQQRGGGFFSGVLTALT-------GVAVILLVYH 163

  Fly   316 ----PSAHGGGIGSTAMKFMPDVLVRRLVEKW--------------WGPDLQAKKISEKASSCMH 362
                .|.||             :||.:.|:||              |....:.:.:||:.:..:.
  Rat   164 WRSRESEHG-------------LLVHKAVDKWTTEEVVLWLEQLGPWASLYRDRFLSERVNGRLL 215

  Fly   363 LNLLDDALKFCNASLEKSPANFKSLCLRAEVLLKLSHYQS-SLADIENALRTRCTSPKAHYLRAL 426
            |.|.::       ...::|...::...|..:|::|...:: .:...:|....:..:|........
  Rat   216 LTLTEE-------EFSRAPYTIENSSHRRVILMELERVRALGVKPPQNLWEYKAVNPGRSLFLLY 273

  Fly   427 ALSGLGRL 434
            ||....||
  Rat   274 ALKSSPRL 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32369NP_001246660.1 RING 183..>206 CDD:302633 13/22 (59%)
TPR_11 349..412 CDD:290150 9/63 (14%)
TPR repeat 350..378 CDD:276809 4/27 (15%)
TPR_11 383..449 CDD:290150 9/53 (17%)
TPR repeat 383..413 CDD:276809 4/30 (13%)
RING 687..729 CDD:238093
LON 791..1005 CDD:271862
LON_substr_bdg 802..1001 CDD:280370
BfarNP_001013143.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24 5/22 (23%)
RING-HC_BAR 32..77 CDD:319411 18/47 (38%)
SAM_BAR 179..249 CDD:188912 12/76 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2802
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.