DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32369 and Lonrf2

DIOPT Version :10

Sequence 1:NP_729296.1 Gene:CG32369 / 38873 FlyBaseID:FBgn0052369 Length:1066 Species:Drosophila melanogaster
Sequence 2:XP_006244931.1 Gene:Lonrf2 / 301361 RGDID:1562137 Length:753 Species:Rattus norvegicus


Alignment Length:1004 Identity:236/1004 - (23%)
Similarity:360/1004 - (35%) Gaps:380/1004 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 LAESFAKVGSLPEAFDVYELIASRQFDGHVPLDKLNTLASALTTHI----------RQMGGIATP 96
            |.|:.|:.|.||||...:...|   ..|.:...:|:.|||.|...:          .:.||.|:.
  Rat    62 LGEALARAGRLPEAIGAFRGAA---LLGPLQPGELSELASGLARALGLREKRPPVAARPGGCASG 123

  Fly    97 TPTPTPTPMSAVHVKSPRISERLDMMPWSRYHHQGKQNQAEQGEFLRGVGESMDEAGDSPLDMHS 161
            |..|.          :||                                               
  Rat   124 TSGPV----------APR----------------------------------------------- 131

  Fly   162 PTRELRVPSPLQDLEDFDPLMCPLCSDILRCPVTTNCGHTFCRQCCETITQCNICQVRFPRIQAS 226
                             |.|.||.|..:|..|||.:.|.|.|::|.|.:                
  Rat   132 -----------------DLLGCPRCGRLLYKPVTLSSGLTVCKRCVEQV---------------- 163

  Fly   227 SPGPPVCALTTTTASGAGSSLFTAPSNHNANLSLISFPVGYGVQLSSSVQRLAAPPMTVTTTTVA 291
                ||.|                                       ..:|:             
  Rat   164 ----PVRA---------------------------------------QARRV------------- 172

  Fly   292 STTATATTTMASTSAAAALGLSAYPSAHGGGIGSTAMKFMPDVLVRRLVEKWWGPDLQAKKISEK 356
                                                     :|::..|:|:.:..:.:.::::.:
  Rat   173 -----------------------------------------NVVLSGLLERCFPAECRLRRLACQ 196

  Fly   357 ASSCMHLNLLDDALKFCNASLEKSPANFKSLCLRAEVLLKLSHYQSSLADIENALRTRCTSPKAH 421
            |.........:.||..|..:|:.:|.:...|.||||:.|.:.:|:.:|.|.:...:......|.|
  Rat   197 ARGLQRQQQPEAALLRCQQALDMAPDDSSLLLLRAELYLTMKNYEQALQDADTVCQREPLLTKGH 261

  Fly   422 YLRALALSGLGRLEEALYNGFLAICLDKKTNLSNSEIFQHDLAKILQRLLAHMPKNRTSLSSATV 486
            :::|..||||||.:|.|......:.|:.:.|.:..|     ..|::..:.....:|         
  Rat   262 HIKAQILSGLGRNKEVLKEFIYCLALNPECNSAKKE-----TQKVICEVFFSASEN--------- 312

  Fly   487 PVFQQQHRNFATSRAPYPLLWEQVRRRRKQQHHHHHHHHHHHVHLDDVEDEFGHYNN-------- 543
               :||:...:|...|..|...|:..:                  :.:|:..||.|.        
  Rat   313 ---EQQNSAPSTQTGPKALCDGQMSPQ------------------NPLEEAGGHANADSPKTPSE 356

  Fly   544 -------------YIMAGDDMEEEVEVEVEGGEP----GSLHLDGDFLFPSALDFMDHHRHQRHV 591
                         |.:.|...||:.:. :||..|    |:|...    .||..:..:...:....
  Rat   357 KPDVPENTNSSVLYFILGLHCEEDKKA-LEGVIPAAPSGTLKRQ----LPSDAEDKELDVNTPEK 416

  Fly   592 FEQKQFDLQPRRHANRKHCKRKWSVAMESMGGKDLEEEDVDRAHAAGESQRCSRLFAGVLDRTQQ 656
            ..:|..|..|:|:||                  .||||                           
  Rat   417 IPKKDADSSPQRNAN------------------SLEEE--------------------------- 436

  Fly   657 ELQRLKKLDKSAPSLAVSSVAGQLIDASDFDCVVCSRTLWKPVVTPCGHTYCLVCLDRCMDYNSP 721
                        |...        |||:||:|.:|.|.|::||.||||||:||.||:||:|:...
  Rat   437 ------------PEFT--------IDATDFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPH 481

  Fly   722 CPLCMSPLVEFNVNASASTSASQHPNPNQNQIHLHPGSSSPVPFALAKR--PVTKFLEAAMKRFI 784
            ||||...|.|.                                  ||.|  .||...|..:.|::
  Rat   482 CPLCKDKLSEL----------------------------------LATRNFNVTVLTEELIFRYL 512

  Fly   785 PDHYEARFRQEIDQEPS--------VPVFICTAAFPAVPCPLFVCEPRYRLMVRRAVESGDKTFG 841
            ||....| ::..|:|.|        ||:|:|..|||.|||||.|.|||||||:||.:|:|.|.||
  Rat   513 PDELSDR-KRVYDEEMSELSHLTRDVPIFVCAMAFPTVPCPLHVFEPRYRLMIRRCMETGTKRFG 576

  Fly   842 --IVQPNGGKSRYYDVGTILDIRDCVQLGDGCSILSTIGCKRFKILARNEKDGYETAKVEYICDE 904
              :...|.|.|.|   |.:|:|:|.....||.|::..:|..||::|:...:|||.||.:||:.||
  Rat   577 MCLSAENAGISEY---GCMLEIKDVRTFPDGSSVVDAVGISRFRVLSHRHRDGYNTADIEYLEDE 638

  Fly   905 PIADEQVKILAGMQGVVLAKASEWFESLSTEQKHEILQSFGQMPPLEPNWELISDGPAWAWWIIA 969
            .:...:.:.|..:...|..::..||.||....|.:||..||.||..||..:..|.||||:|||:|
  Rat   639 KVEGAEFEELTALHESVYQQSVSWFASLQDHMKKQILSHFGSMPDREPEPQSNSSGPAWSWWILA 703

  Fly   970 LLPLSQQLKVDILATTSLEKRLRAIDKTL 998
            :|||.::.::.||...||::||.||.:.|
  Rat   704 VLPLERKAQLAILGMGSLKERLLAIRRIL 732

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32369NP_729296.1 RING_Ubox 179..222 CDD:473075 14/42 (33%)
TPR repeat 350..378 CDD:276809 4/27 (15%)
TPR 357..>438 CDD:440225 25/80 (31%)
Spy 363..>517 CDD:443119 36/153 (24%)
TPR repeat 383..413 CDD:276809 9/29 (31%)
RING-HC_LONFs_rpt2 685..729 CDD:438177 25/43 (58%)
LON/PUA 811..999 CDD:442054 82/190 (43%)
Lonrf2XP_006244931.1 LapB 35..290 CDD:442196 70/417 (17%)
RING_Ubox 132..>162 CDD:473075 13/29 (45%)
TPR repeat 223..253 CDD:276809 9/29 (31%)
TPR repeat 258..281 CDD:276809 11/22 (50%)
COG5222 <308..563 CDD:227547 94/389 (24%)
RING-HC_LONFs_rpt2 445..489 CDD:438177 25/43 (58%)
LON/PUA 533..732 CDD:442054 86/201 (43%)

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