DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32369 and Lonrf3

DIOPT Version :9

Sequence 1:NP_001246660.1 Gene:CG32369 / 38873 FlyBaseID:FBgn0052369 Length:1066 Species:Drosophila melanogaster
Sequence 2:XP_006257509.1 Gene:Lonrf3 / 298322 RGDID:1565451 Length:809 Species:Rattus norvegicus


Alignment Length:1026 Identity:256/1026 - (24%)
Similarity:399/1026 - (38%) Gaps:312/1026 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 EQQDQGHHMPPSSPIQCYLPHNDSQNSLHYLL--AESFAKVGSLPEAFDVYELIASRQFDGHVPL 73
            ::.:|...:..|:|.:|.:           ||  |::.|..|.|.||.:||..::.||   .:..
  Rat    56 QEPEQSQPLAASTPPECKV-----------LLTQADALASRGHLREALEVYRQLSERQ---QLVA 106

  Fly    74 DKLNTLASALTTHIRQMGGIATPTPTPTPTPMSAVHVKSPRISERLDMMPWSRYHHQGKQNQAEQ 138
            ::|..|...|...|.| ..:..|.|. .|:..|:....:                          
  Rat   107 EQLEQLVRCLADSIPQ-DELMAPAPA-DPSATSSCCAAA-------------------------- 143

  Fly   139 GEFLRGVGESMDEAGDSPLDMHSPTRELRVPSPLQDLEDFDPLMCPLCSDILRCPVTTNCGHTFC 203
               |:..||:   |..:|                   |.:|...|..|...|..||:..||||||
  Rat   144 ---LKKAGEA---AAVAP-------------------EVWDGFKCRKCHGFLSDPVSLWCGHTFC 183

  Fly   204 RQCCE----TITQCNICQVRFPRIQASS---PGPPVCALTTTTASGAGSSLFTAPSNHNANLSLI 261
            :.|.|    ...:|.:|.|:...:..:|   .||                               
  Rat   184 KLCLERGRAADRRCALCGVKLSALMVASGRARGP------------------------------- 217

  Fly   262 SFPVGYGVQLSSSVQRLAAP--PMTVTTTTVASTTATATTTMASTSAAAALGLSAYPSAHGGGIG 324
                           |.:.|  |:.:....|.|                            |.:|
  Rat   218 ---------------RRSGPQAPLQLRVNVVLS----------------------------GLLG 239

  Fly   325 STAMKFMPDVLVRRLVEKWWGPDLQAKKISEKASSCMHLNLLDDALKFCNASLEKSPANFKSLCL 389
                |..|            || .:|.::..:.:.......::.||...|.::..:|.:......
  Rat   240 ----KLFP------------GP-ARASQLRHEGNRLYRERQVEAALLKYNEAVRLAPNDHLLYSN 287

  Fly   390 RAEVLLKLSHYQSSLADIENALRTRCTSPKAHYLRALALSGLGRLEEALYNGFLAICLDKKTNLS 454
            |:::...|..::.:|.|.|.|.:.|....|||:.:|.||:.||:::|||......:.||.|...:
  Rat   288 RSQIYFTLESHEDALHDAEIACKLRPMGFKAHFRKAQALATLGKVKEALREFLYCVSLDGKNKRA 352

  Fly   455 NSEIFQHDLAKILQRLLAHMPKNRTSLSSATVPVFQQQHR-NFATSRAPYPLLWEQVRRRRKQQH 518
            .||         .||||       .|..|.:||...|:|. :.....||:|.|.|.|.....:  
  Rat   353 RSE---------AQRLL-------FSFFSPSVPGESQEHSPDILKLLAPHPRLKEHVESMATE-- 399

  Fly   519 HHHHHHHHHHVHLDDVEDEFGHYNNYIMAGDDMEEEVEVEVEGGEPGSLHLDGDFLFPSALDFMD 583
                ...|:...|.....|..|.:|...|....|....|.:..|:                    
  Rat   400 ----GTSHNLPKLSQENSELPHCSNQEGAAAREESSSLVNMAQGK-------------------- 440

  Fly   584 HHRHQRHVFEQKQFDLQPRRHANRKHCKRKWSVAMESMGGKDLEEEDVDRAHAAGESQRCSRLFA 648
                                 .:||..:           .|..|||:.|.|     |.|..:...
  Rat   441 ---------------------VSRKEDR-----------AKSQEEEEQDAA-----SVRTGKCLE 468

  Fly   649 GVLDRTQQELQ-------RLKKLDKSA-----PSLAVSSVAGQLIDASDFDCVVCSRTLWKPVVT 701
            ...:|.|.|.|       ::.|.|..|     |.|::...:   .||||.:|.:|.|..::||.|
  Rat   469 KKRNRCQIETQEDTELPNKVSKQDLPAEQGAKPDLSIPLGS---FDASDLECSLCMRLFYEPVTT 530

  Fly   702 PCGHTYCLVCLDRCMDYNSPCPLCMSPLVEFNVNASASTSASQHPNPNQNQIHLHPGSSSPVPFA 766
            |||||:||.||:||:|:|:.||||...|::                                  .
  Rat   531 PCGHTFCLKCLERCLDHNAKCPLCKDVLLQ----------------------------------C 561

  Fly   767 LAKRPVTK--FLEAAMKRFIPDHYEAR---FRQEIDQ----EPSVPVFICTAAFPAVPCPLFVCE 822
            |..|..:|  .:|..:.:|:|:..:.|   :.:|:::    ..:||:|:||.|:|.|||||.:.|
  Rat   562 LPSRKYSKNVIMEELIAKFLPEELKERRRLYEEEMEELSNLNKNVPIFVCTMAYPTVPCPLHIFE 626

  Fly   823 PRYRLMVRRAVESGDKTFGIV--QPNGGKSRYYDVGTILDIRDCVQLGDGCSILSTIGCKRFKIL 885
            |.||||:||.:|:|.|.||:.  .|..|.:.|   |.||:||:.....||.|::.:||.:|||:|
  Rat   627 PCYRLMIRRCIETGTKQFGMCLGDPVKGFAEY---GCILEIRNVQFFSDGRSVVDSIGKRRFKVL 688

  Fly   886 ARNEKDGYETAKVEYICDEPIADEQVKILAGMQGVVLAKASEWFESLSTEQKHEILQSFGQMPPL 950
            .:.::|||.||.:|||.|:.:..:....|.|:...|..:||.||.||.|..|:.||..||.||..
  Rat   689 HQGQRDGYNTADIEYIEDQKVQGDDCAELVGLHNCVYEQASSWFHSLKTSLKNRILNHFGPMPEK 753

  Fly   951 EPNWELISDGPAWAWWIIALLPLSQQLKVDILATTSLEKRLRAIDKTLDWL 1001
            :.:.::..:||||.||.:|:|||..:.::..||..||:.||..|.:.|.::
  Rat   754 DEDPQVNPNGPAWCWWTLAVLPLESRAQLPFLAMRSLKDRLNGIRRILAFI 804

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32369NP_001246660.1 RING 183..>206 CDD:302633 11/22 (50%)
TPR_11 349..412 CDD:290150 11/62 (18%)
TPR repeat 350..378 CDD:276809 4/27 (15%)
TPR_11 383..449 CDD:290150 19/65 (29%)
TPR repeat 383..413 CDD:276809 6/29 (21%)
RING 687..729 CDD:238093 23/41 (56%)
LON 791..1005 CDD:271862 88/220 (40%)
LON_substr_bdg 802..1001 CDD:280370 86/200 (43%)
Lonrf3XP_006257509.1 RING 163..200 CDD:302633 14/36 (39%)
TPR_11 247..313 CDD:290150 11/65 (17%)
TPR repeat 248..276 CDD:276809 4/27 (15%)
TPR repeat 281..311 CDD:276809 6/29 (21%)
TPR repeat 316..339 CDD:276809 11/22 (50%)
RING 516..555 CDD:238093 22/38 (58%)
LON_substr_bdg 605..806 CDD:280370 86/203 (42%)
LON 616..802 CDD:271862 79/188 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166339953
Domainoid 1 1.000 176 1.000 Domainoid score I3516
eggNOG 1 0.900 - - E1_COG2802
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 291 1.000 Inparanoid score I2699
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D207900at33208
OrthoFinder 1 1.000 - - FOG0001000
OrthoInspector 1 1.000 - - otm46439
orthoMCL 1 0.900 - - OOG6_101814
Panther 1 1.100 - - O PTHR23327
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X746
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.760

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