DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32369 and lonrf3

DIOPT Version :10

Sequence 1:NP_729296.1 Gene:CG32369 / 38873 FlyBaseID:FBgn0052369 Length:1066 Species:Drosophila melanogaster
Sequence 2:XP_002934588.3 Gene:lonrf3 / 100486178 XenbaseID:XB-GENE-985290 Length:738 Species:Xenopus tropicalis


Alignment Length:916 Identity:223/916 - (24%)
Similarity:352/916 - (38%) Gaps:273/916 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 SPRISERLDMMPWSRYHHQGKQNQAEQGEFLRGVGESMDEAGDSPLDMHSPTRELRVPSPLQDLE 176
            |.|:.:..|:...:..|   |:..||..|.|           .|.|..|..|:| .:|.|.|.:.
 Frog    58 SGRLQDACDLFQRAAMH---KKVCAEDLEAL-----------VSCLADHIRTKE-GLPPPDQRVA 107

  Fly   177 DFDPLMCPLCSDILRCPVTTNCGHTFCRQCCE----TITQCNICQVRFPRIQASSPGPPVCALTT 237
            ....|.|..|......|||..||||||::|.|    :.::|.:|:|                   
 Frog   108 KSAVLTCRQCQGFFFEPVTLLCGHTFCKKCLECQGGSKSECKVCRV------------------- 153

  Fly   238 TTASGAGSSLFTAPSNHNANLSLISFPVGYGVQLSSSVQRLAAPPMTVTTTTVASTTATATTTMA 302
                                                                             
 Frog   154 ----------------------------------------------------------------- 153

  Fly   303 STSAAAALGLSAYPSAHGGGIGSTAMKFMPDVLVRRLVEKWWGPDLQAKKISEKASSCMHLNLLD 367
                                  ||...|..:||:..::.||:...::|.::.::.::.......:
 Frog   154 ----------------------STEHPFRVNVLLSNILSKWFPSQVKAVRLRQEGNALYKDCKWE 196

  Fly   368 DALKFCNASLEKSPANFKSLCLRAEVLLKLSHYQSSLADIENALRTRCTSPKAHYLRALALSGLG 432
            :||...|.::..:|.:......||.:...|..|..:|.|.|...:.:....|.|..:|.:|..||
 Frog   197 EALARYNEAISIAPQDHLLYSNRAMIHFSLKSYGCALQDAETTCKLQPYWLKGHLRKAQSLVNLG 261

  Fly   433 RLEEALYNGFLAICLDKKT------------NLSNSEIFQHDLAKILQRLLAHMPKNRTSLSSAT 485
            |.|::|......:.|:.:.            ||.:.:..|.||.:|||.:...:......|:|.:
 Frog   262 RSEDSLKEFLFCLALETENRTAKCEAQKLLLNLLSLQNNQGDLPEILQTMSHPLRLKGNVLNSLS 326

  Fly   486 VPVFQQQHRNFATSRAPYPLLWEQVRRRRKQQHHHHHHHHHHHVHLDDVEDEFGHYNNYIMAGDD 550
            .|......:..           :.|....|:           .|.:.|..|..|:.:.::: ...
 Frog   327 TPTPSSNMQRL-----------KMVNMDIKK-----------GVTISDDTDPKGNSSMWLL-HQT 368

  Fly   551 MEEEVE----VEVEGGEPGSLHLDGDFLFPSALDFMDHHRHQRHVFEQKQFDLQPRRHANRKHCK 611
            .|.|:.    .:....||.:       |.|||.:.:                       .||.|.
 Frog   369 RESELSCSEMTKAFTPEPAA-------LVPSACNTL-----------------------KRKACS 403

  Fly   612 RKWSVAMESMGGKDLEEEDVDRAHAAGESQRCSRLFAGVLDRTQQELQRLKKLDKSAPSLAVSSV 676
            ::...:.|.:..|.|:.:      ||         ..|.|..           |.|:.|      
 Frog   404 KETECSSEHIPCKALKRD------AA---------VTGTLGN-----------DHSSAS------ 436

  Fly   677 AGQLIDASDFDCVVCSRTLWKPVVTPCGHTYCLVCLDRCMDYNSPCPLCMSPLVEFNVNASASTS 741
               .:|.||.||.:|.|.|::||.|||||||||.||:||:|:|..||||...|.|:         
 Frog   437 ---CVDLSDLDCSLCMRLLYEPVTTPCGHTYCLKCLERCLDHNPKCPLCKEDLCEY--------- 489

  Fly   742 ASQHPNPNQNQIHLHPGSSSPVPFALAKRPV--TKFLEAAMKRFIPDHYEAR---FRQEIDQ--- 798
                                     ||.|..  |:.:|..:..:.||..:.|   :.:||.:   
 Frog   490 -------------------------LAIRTFCKTELMEDLIASYFPDELKDRKTVYEEEIAELSN 529

  Fly   799 -EPSVPVFICTAAFPAVPCPLFVCEPRYRLMVRRAVESGDKTFGIVQPNGGKSRYYDVGTILDIR 862
             ..:||:|:||.|:|.|||||.:.||.||||:||.:|:|.|.||:...:..|. :.|.|.:|:||
 Frog   530 LNKNVPIFVCTMAYPTVPCPLHIFEPCYRLMIRRCMETGTKQFGMCIGDSVKG-FADYGCMLEIR 593

  Fly   863 DCVQLGDGCSILSTIGCKRFKILARNEKDGYETAKVEYICDEPIADEQVKILAGMQGVVLAKASE 927
            :.....||.|::.:||.:|||::..:::|||.||.:|||.|.....::...|..:...|..:|..
 Frog   594 NVEFFADGRSVVDSIGKRRFKVIRHSQRDGYNTADIEYIEDHKAQGQEYDDLLTLHNAVYDQAFN 658

  Fly   928 WFESLSTEQKHEILQSFGQMPPLEPNWELISDGPAWAWWIIALLPLSQQLKVDILATTSLEKRLR 992
            ||.:|....|..||..||.||..:.:.:...:||||.|||:|:|||..:.::..||.|||:.||.
 Frog   659 WFSTLKPALKSRILSHFGPMPANDCDIQANPNGPAWCWWILAVLPLESRAQLPFLAMTSLKDRLT 723

  Fly   993 AIDKTL 998
            .|.:.|
 Frog   724 GIRRVL 729

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32369NP_729296.1 RING_Ubox 179..222 CDD:473075 17/46 (37%)
TPR repeat 350..378 CDD:276809 4/27 (15%)
TPR 357..>438 CDD:440225 19/80 (24%)
Spy 363..>517 CDD:443119 34/165 (21%)
TPR repeat 383..413 CDD:276809 7/29 (24%)
RING-HC_LONFs_rpt2 685..729 CDD:438177 27/43 (63%)
LON/PUA 811..999 CDD:442054 75/188 (40%)
lonrf3XP_002934588.3 RING-HC_LONFs_rpt1 111..155 CDD:438176 17/149 (11%)
TPR repeat 179..207 CDD:276809 4/27 (15%)
TPR 186..>283 CDD:440225 21/96 (22%)
TPR repeat 212..242 CDD:276809 7/29 (24%)
TPR repeat 247..270 CDD:276809 9/22 (41%)
RING-HC_LONFs_rpt2 442..486 CDD:438177 27/43 (63%)
LON/PUA 543..729 CDD:442054 74/186 (40%)

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