DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32369 and lonrf1l

DIOPT Version :9

Sequence 1:NP_001246660.1 Gene:CG32369 / 38873 FlyBaseID:FBgn0052369 Length:1066 Species:Drosophila melanogaster
Sequence 2:NP_001264163.1 Gene:lonrf1l / 100317496 ZFINID:ZDB-GENE-081104-397 Length:751 Species:Danio rerio


Alignment Length:936 Identity:224/936 - (23%)
Similarity:367/936 - (39%) Gaps:284/936 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 RISERLDMMPWSRYHHQGKQNQAEQ--GEFLRGVGESMDEAGDSPLDMHSPTRELRVPSPLQDLE 176
            |:.|.:||...:..:...:..|...  |..||...:..:|         ||.|.  .|:..||.|
Zfish    52 RLKEAVDMFAMALRYGPVRPEQLSSLVGCVLRNFKKKSEE---------SPARS--EPNWTQDCE 105

  Fly   177 DFDPLMCPLCSDILRCPVTTNCGHTFCRQCCE--TITQCNICQVRFPRIQASSPGPPVCALTTTT 239
                |.||.|...:..|||..||||:||:|.:  |.:||.:|.....|    .||.|        
Zfish   106 ----LDCPGCHCFIAEPVTVTCGHTYCRRCLQHSTFSQCKVCNEDIRR----RPGEP-------- 154

  Fly   240 ASGAGSSLFTAPSNHNANLSLISFPVGYGVQLSSSVQRLAAPPMTVTTTTVASTTATATTTMAST 304
                                                 ||                          
Zfish   155 -------------------------------------RL-------------------------- 156

  Fly   305 SAAAALGLSAYPSAHGGGIGSTAMKFMPDVLVRRLVEKWWGPDLQAKKISEKASSCMHLNLLDDA 369
                                        :|::..|::||:..|::..|...:|.|.:.....|.|
Zfish   157 ----------------------------NVILCGLLDKWFPEDVKRTKYLGEAESLLKSKQYDKA 193

  Fly   370 LKFCNASLEKSPANFKSLCLRAEVLLKLSHYQSSLADIENALRTRCTSPKAHYLRALALSGLGRL 434
            :...:..|:...:|.......||....|.|::.:|...|:.| |....|:.::.:|..|..:|.:
Zfish   194 IALTSRLLDYGSSNMWVQICHAEAHRGLKHHRQALEIWESCL-TVSPFPEGYFQKAKILQEMGHV 257

  Fly   435 EEALYNGFLAICLDKKTNLSNSEIFQHDLAKILQRLLAHMPKN-RTSLSSATVPVFQQQHRNFAT 498
            :|:|......:.||:..:.:..|:     ..||..|||....| :..|...|             
Zfish   258 DESLQVFLQCLALDENFHQAKREV-----ELILHDLLAPASDNVKVGLRETT------------- 304

  Fly   499 SRAPYPLLWEQVRRRRKQQHHHHHHHHHHHVHLDDVEDEFGHYNNYIMAGDDMEEEVEVEVEGGE 563
                                                .:...|..:..:..::.|:..:::::...
Zfish   305 ------------------------------------HNTCSHLRSKTLVSENQEQNQQIQMQNQH 333

  Fly   564 PGSLHLDGDFLFPSALDFMDHHRHQRHVFEQKQFDLQPRRHANRKHCKRKWSVAMESMGGKDLEE 628
            ...:......|.|...:            :..:.:...|...:|.|     |:.:..:||  :.|
Zfish   334 QSDMWTTSAQLLPKTAE------------KAGRSESLERSGLSRAH-----SLRIHGIGG--VVE 379

  Fly   629 EDVDRAHAA---GESQRCSRLFAGVLDRTQQELQRLKKLDKSAPSLAVS---------------- 674
            |.:.|..:|   |:..:      |.|      |:|...:.::.|.:|.|                
Zfish   380 EGLKRVSSAPQLGDPDK------GAL------LKRKLSVSEAGPGIAHSHSTKCKKQLVTASAAT 432

  Fly   675 -----------SVAGQLIDASDFDCVVCSRTLWKPVVTPCGHTYCLVCLDRCMDYNSPCPLCMSP 728
                       ::...|:|.:||:|.:|.|..::||.||||||:|..||:||:|:|..||||...
Zfish   433 PVVMEEAKSHQTLPKNLLDPNDFECSLCMRLFYQPVTTPCGHTFCTNCLERCLDHNPQCPLCKES 497

  Fly   729 LVEFNVNASASTSASQHPNPNQNQIHLHPGSSSPVPFALAKRPVTKFLEAAMKRFIPDHYEARFR 793
            |.|:                                .|..|..||:.|:..:|:.:|..:..|.:
Zfish   498 LKEY--------------------------------LAFRKYTVTQVLDNIIKQHLPKEHSERVK 530

  Fly   794 ------QEI-DQEPSVPVFICTAAFPAVPCPLFVCEPRYRLMVRRAVESGDKTFG--IVQPNGGK 849
                  :|: |...:||:|:||.|:|.|||||.|.|||||||:||.:|:|.:.||  |..|..| 
Zfish   531 LHAEETKELSDLTKNVPIFVCTMAYPTVPCPLHVFEPRYRLMIRRCMETGTRQFGMCISDPQKG- 594

  Fly   850 SRYYDVGTILDIRDCVQLGDGCSILSTIGCKRFKILARNEKDGYETAKVEYICDEPIADEQ-VKI 913
              :.|.|.:|.||....|.||.|::.|||.|||.:|:|..:|||..|.:||:.|..:.||: :|.
Zfish   595 --FVDHGCMLQIRSVHFLPDGRSVVDTIGGKRFHVLSRGMRDGYCIANIEYLQDTKVNDEEDLKK 657

  Fly   914 LAGMQGVVLAKASEWFESLSTEQKHEILQSFGQMPPLEPNWELISDGPAWAWWIIALLPLSQQLK 978
            |..:...|..:|.:||::|....:::|||.||.||..|.:.:...:|||..||::|:||:..:.:
Zfish   658 LQVLHDQVYDQARKWFQNLENRFRNQILQHFGPMPEREADIQATPNGPACCWWLLAVLPVDPRYQ 722

  Fly   979 VDILATTSLEKRLRAIDKTLDWLHDL 1004
            :.:|:.|:|::||..|...|.:|.:|
Zfish   723 LSVLSMTTLKERLVKIQHILTYLQNL 748

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32369NP_001246660.1 RING 183..>206 CDD:302633 12/22 (55%)
TPR_11 349..412 CDD:290150 13/62 (21%)
TPR repeat 350..378 CDD:276809 5/27 (19%)
TPR_11 383..449 CDD:290150 16/65 (25%)
TPR repeat 383..413 CDD:276809 8/29 (28%)
RING 687..729 CDD:238093 22/41 (54%)
LON 791..1005 CDD:271862 90/224 (40%)
LON_substr_bdg 802..1001 CDD:280370 85/201 (42%)
lonrf1lNP_001264163.1 RING 108..>132 CDD:302633 12/23 (52%)
TPR repeat 177..202 CDD:276809 4/24 (17%)
TPR_16 178..240 CDD:290168 14/62 (23%)
TPR repeat 207..237 CDD:276809 8/30 (27%)
TPR_12 <214..273 CDD:290160 16/59 (27%)
TPR repeat 241..269 CDD:276809 6/27 (22%)
RING 456..498 CDD:238093 22/41 (54%)
LON 541..746 CDD:271862 86/207 (42%)
LON_substr_bdg 545..743 CDD:280370 84/200 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579765
Domainoid 1 1.000 172 1.000 Domainoid score I3668
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 297 1.000 Inparanoid score I2704
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D207900at33208
OrthoFinder 1 1.000 - - FOG0001000
OrthoInspector 1 1.000 - - otm25890
orthoMCL 1 0.900 - - OOG6_101814
Panther 1 1.100 - - O PTHR23327
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X746
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.900

Return to query results.
Submit another query.