DRSC/TRiP Functional Genomics Resources

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Protein Alignment Clk and ARNT2

DIOPT Version :10

Sequence 1:NP_001014576.1 Gene:Clk / 38872 FlyBaseID:FBgn0023076 Length:1027 Species:Drosophila melanogaster
Sequence 2:NP_055677.3 Gene:ARNT2 / 9915 HGNCID:16876 Length:717 Species:Homo sapiens


Alignment Length:691 Identity:150/691 - (21%)
Similarity:255/691 - (36%) Gaps:193/691 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDDESDDKDDTKSFLCRKSRNLSEKKRRDQFNSLVNDLSALISTSS---RKMDKSTVLKSTIAFL 62
            ||.:.:|.:....| .|::.:..|::||::....:.:||.::.|.|   ||.||.|:|:..::.:
Human    50 MDFDDEDGEGPSKF-SRENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTILRMAVSHM 113

  Fly    63 KN----HNEATDRSKVFEIQQDWKPAFLSNDEYTHLMLESLDGFMMVFSS-MGSIFYASESITSQ 122
            |:    .|::||.:        :||:||:..|..||:||:.|||:.|.:: .|.:.|.|:|:|..
Human   114 KSMRGTGNKSTDGA--------YKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPV 170

  Fly   123 LGYLPQDLYNMTIYDLAYEMDHEALLNIFMNPTPVIEPRQTDISSS------------------- 168
            |.....:.:..|:|:..:..|.|.|..........:..|..|:.:.                   
Human   171 LNQPQSEWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRR 235

  Fly   169 ------------------NQITFYTHLRRGGMEKVDAN--AYELVKFVGYFRNDTNTSTGSSSEV 213
                              |:||......|.|:..|...  .|.:|...||.:             
Human   236 SFICRMRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEAQYAVVHCTGYIK------------- 287

  Fly   214 SNGSNGQPAVLPRIFQQNPNAEVDKKLVFVGTGRVQ---NPQLIREMSIIDPTSNEFTSKHSMEW 275
                 ..|.....|.:::.:.....|...|..||:|   :|..:....:..||  ||.|:|:.:.
Human   288 -----AWPPAGMTIPEEDADVGQGSKYCLVAIGRLQVTSSPVCMDMNGMSVPT--EFLSRHNSDG 345

  Fly   276 KFLFLDHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELRQT----GEGKSCYYRFLTKG 336
            ...|:|.|...:|||.|.::||....::.|.:|...:   .|..:|.    |:..|..|||.||.
Human   346 IITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSHL---RESFQQVVKLKGQVLSVMYRFRTKN 407

  Fly   337 QQWIWLQTDYYVSYHQFNSKPDYVVCTH------------------------------------- 364
            ::|:.::|..:...:.::.:.:|::||:                                     
Human   408 REWMLIRTSSFTFQNPYSDEIEYIICTNTNVKQLQQQQAELEVHQRDGLSSYDLSQVPVPNLPAG 472

  Fly   365 -----KVVSYAEVL----KDSRKEGQKSGNSNSITNNGSSKVIAST------------GTSSKSA 408
                 |.|..|:.:    :|.|.....:|.|.|.....||...|.|            |.|.|:.
Human   473 VHEAGKSVEKADAIFSQERDPRFAEMFAGISASEKKMMSSASAAGTQQIYSQGSPFPSGHSGKAF 537

  Fly   409 SATTT----LRDFELSS---QNLD--STLLGNSLASL--------GTETAATSPAVDSSPMW-SA 455
            |::..    :.|.:.||   ||:.  |..|..|..:.        |.:..:.|....|||.. ..
Human   538 SSSVVHVPGVNDIQSSSSTGQNMSQISRQLNQSQVAWTGSRPPFPGQQIPSQSSKTQSSPFGIGT 602

  Fly   456 SAVQPSGSCQINPLKTSRPASSYGNISSTGISPKAKRKCYFYNNRGNDSDSTSMSTDSVTSRQSM 520
            |...|:.....:||.:...:|..||.               |::..|.:...:.|..|....|..
Human   603 SHTYPADPSSYSPLSSPATSSPSGNA---------------YSSLANRTPGFAESGQSSGQFQGR 652

  Fly   521 MTHVSSQSQRQRSHHREHHRENHHNQSHHHMQQQQQHQNQQ 561
            .:.|.||.|.|                ||..|..:||.:||
Human   653 PSEVWSQWQSQ----------------HHGQQSGEQHSHQQ 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClkNP_001014576.1 bHLH-PAS_dCLOCK 11..86 CDD:381578 21/81 (26%)
PAS 93..153 CDD:214512 19/60 (32%)
PAS_11 265..368 CDD:464214 30/148 (20%)
ARNT2NP_055677.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 35..74 6/24 (25%)
bHLH-PAS_ARNT 62..124 CDD:381517 17/62 (27%)
PAS 137..243 CDD:395786 22/105 (21%)
PAS_11 336..436 CDD:464214 29/102 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 548..717 37/161 (23%)
Blue background indicates that the domain is not in the aligned region.

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