Sequence 1: | NP_001014576.1 | Gene: | Clk / 38872 | FlyBaseID: | FBgn0023076 | Length: | 1027 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021335474.1 | Gene: | ncoa3 / 564519 | ZFINID: | ZDB-GENE-051107-8 | Length: | 1504 | Species: | Danio rerio |
Alignment Length: | 1505 | Identity: | 259/1505 - (17%) |
---|---|---|---|
Similarity: | 417/1505 - (27%) | Gaps: | 696/1505 - (46%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 LCR-KSRNLS---------EKKRRDQFNSLVNDLSALISTS-------SRKMDKSTVLKSTIAFL 62
Fly 63 KNHNEA---------TDRSKVFEIQQDWKPAFLSNDEYTHLMLESLDGFMMVFSSMGSIFYASES 118
Fly 119 ITSQLGYLPQDLYNMTIYDLAYEMDHE-------------------------------------- 145
Fly 146 ----------------------------------------------------------------- 145
Fly 146 -------ALLNIFMNP------------------------------------------------- 154
Fly 155 TPVIEPRQTDIS----SSNQITFY-THL----------RRGG-MEKVDANAYELVKFVGYFRNDT 203
Fly 204 NTSTGSSSEVSNGSNGQPAVLP----------RIFQQNPNAEVDKKLVFVGTGRVQNPQLIREMS 258
Fly 259 IIDPTS-----NEFTSKHSMEWKFLFLDH------------------------------------ 282
Fly 283 --------RAPPIIGYMPFE------------VLGTSGY------DYYHFDDLDSIVACHEELRQ 321
Fly 322 TGEGKSCYYRFLTKGQQWIWLQTDYYVSYHQFNSKPDYVVCTHKVVSYAEVLKDSRKEGQKS--G 384
Fly 385 NSNSITNNGSSKVIA-STGTSSKSASATTTLRDFELSSQNLDSTLLG----------------NS 432
Fly 433 LAS------LGTETAATSPAVDSSPMWSASAVQPSGSCQINPLKT---SRPASSYGN----ISST 484
Fly 485 GISPKA-------------KRK-CYFYNNRGNDSDSTSMSTDSVTSRQSMMTHVSSQSQRQRSHH 535
Fly 536 REHH--RENHHNQS--HHHMQQQQQHQ--------------------------------NQQ--- 561
Fly 562 --QQHQQHQQLQQQL-------------------------------------------------- 574
Fly 575 ----------------------------QHT------------VGTPKMVPLLPIASTQIMAGNA 599
Fly 600 CQFPQPAYPLASPQLVAPTFLEPPQYLTAIPM---------------QPV--IAPFPVA------ 641
Fly 642 -----PVLSP-----------------LPVQSQTDMLPDTVVMTPTQSQLQDQLQRKHDELQKLI 684
Fly 685 LQQQNELRIVSEQL--------LLS------------------------------RYTYLQ---- 707
Fly 708 -PMMSM--GFAPGNMTAAAVGNLGASGQRGLNFTGSNAVQPQFNQYG----------FALNSEQM 759
Fly 760 LNQ--QDQQMMMQQQQNLHTQHQHNLQQQHQSHSQLQQHT----------------------QQQ 800
Fly 801 HQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLQLQQQNDILLREDIDDIDAFLNLSPLHSLG 865
Fly 866 SQSTI-NPFNS--SSNNNNQSYNGGSNLNNGNQNNNN---RSSNPPQNNNEDSLLS--------- 915
Fly 916 CMQMATESSP 925 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Clk | NP_001014576.1 | HLH | 16..68 | CDD:238036 | 18/68 (26%) |
PAS | 93..153 | CDD:214512 | 24/169 (14%) | ||
PAS | 264..366 | CDD:238075 | 22/168 (13%) | ||
PAS_11 | 265..368 | CDD:291273 | 22/164 (13%) | ||
ncoa3 | XP_021335474.1 | HLH | 32..85 | CDD:197674 | 15/52 (29%) |
PAS | 113..170 | CDD:214512 | 22/56 (39%) | ||
PAS_3 | 256..367 | CDD:330807 | 13/110 (12%) | ||
NCOA_u2 | 490..617 | CDD:318802 | 25/160 (16%) | ||
SRC-1 | 663..773 | CDD:312390 | 30/111 (27%) | ||
DUF4927 | 795..880 | CDD:318508 | 10/84 (12%) | ||
Nuc_rec_co-act | 1094..1141 | CDD:312376 | 8/49 (16%) | ||
DUF1518 | 1348..1406 | CDD:311422 | 14/62 (23%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3561 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.900 |