DRSC/TRiP Functional Genomics Resources

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Protein Alignment Clk and Met

DIOPT Version :9

Sequence 1:NP_001014576.1 Gene:Clk / 38872 FlyBaseID:FBgn0023076 Length:1027 Species:Drosophila melanogaster
Sequence 2:NP_001285132.1 Gene:Met / 32114 FlyBaseID:FBgn0002723 Length:716 Species:Drosophila melanogaster


Alignment Length:747 Identity:147/747 - (19%)
Similarity:259/747 - (34%) Gaps:235/747 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 RKSRNLSEKKRRDQFNSLVNDLSALI---STSSRKMDKSTVLKSTIAFLKNH----NEATDRSKV 74
            |::|||:||:|||:.|:.:.:|:.::   :.|||::||:.||:.....|:..    ..|:.|.|.
  Fly    38 REARNLAEKQRRDKLNASIQELATMVPHAAESSRRLDKTAVLRFATHGLRLQYVFGKSASRRRKK 102

  Fly    75 FEIQQDWKPAFLSND------EYTHLMLESLDGFMMVFSSMGSIFYASESITSQLGYLPQDLYNM 133
            ..::.....|....|      ..|..:::.||...:..:..|.|...|.|:...||:...|||..
  Fly   103 TGLKGTGMSASPVGDLPNPSLHLTDTLMQLLDCCFLTLTCSGQIVLVSTSVEQLLGHCQSDLYGQ 167

  Fly   134 TIYDLAYEMDHEALLNIFMNPTPV--------------IEPRQTDISSS---------------- 168
            .:..:.:. |.:.||...:.|..:              ..|:|...|:|                
  Fly   168 NLLQITHP-DDQDLLRQQLIPRDIETLFYQHQHHQQQGHNPQQHSTSTSASTSGSDLEEEEMETE 231

  Fly   169 -------------------NQIT----------------------FYTHLRRGGMEKVDANAYEL 192
                               |:.|                      |...|.|..........||.
  Fly   232 EHRLGRQQGEADDDEDHPYNRRTPSPRRMAHLATIDDRLRMDRRCFTVRLARASTRAEATRHYER 296

  Fly   193 VKFVGYFRNDTNTSTGSSS----------EVSNGSN---------GQPAVLP----RIFQQNPNA 234
            ||..|.||...::.||.::          ..|..:|         .:.|.:|    .|.|...:.
  Fly   297 VKIDGCFRRSDSSLTGGAAANYPIVSQLIRRSRNNNMLAAAAAVAAEAATVPPQHDAIAQAALHG 361

  Fly   235 EVDKKLVFVGTGRV---QNPQLIREMSI-------IDPTSNEFTSKHSMEWKFLFLDHRAPPIIG 289
            .....:|.|...||   :.|....|.::       .:|...|:.::|.::...:..|.|...:.|
  Fly   362 ISGNDIVLVAMARVLREERPPEETEGTVGLTIYRQPEPYQLEYHTRHLIDGSIIDCDQRIGLVAG 426

  Fly   290 YMPFEVLGTSGYDYYHFDDLDSIVACHEELRQ-----TGEGKSCYYRFLTKGQQWIWLQTDYYVS 349
            ||..||...|.:.:.|.||:..::..   |||     :..|:|| ||.|::..::|:|.|..::.
  Fly   427 YMKDEVRNLSPFCFMHLDDVRWVIVA---LRQMYDCNSDYGESC-YRLLSRNGRFIYLHTKGFLE 487

  Fly   350 YHQFNSKPDYVVCTHKVVSYAEVLKDSRKEGQKSGNSNSITNNGSSKVIASTGTSSKSASATTTL 414
            ..:.::|....:|.:       .|.|.....||   ...:....|:.:.|...|.|.|.....:.
  Fly   488 VDRGSNKVHSFLCVN-------TLLDEEAGRQK---VQEMKEKFSTIIKAEMPTQSSSPDLPASQ 542

  Fly   415 RDFELS----------SQNLDS--TLLGNSLASLGTETAATSPA-------VDSSPMWSASAVQP 460
            ...:|.          .:::||  |:.|..:.|| .:...:|||       :..||..:.:.|.|
  Fly   543 APQQLERIVLYLIENLQKSVDSAETVGGQGMESL-MDDGYSSPANTLTLEELAPSPTPALALVPP 606

  Fly   461 SGSCQINPLKTSRPASSYGNISSTGISPKAKRKCYFYNNRGNDSDSTSMSTDSVTSRQSMMTHVS 525
            :            |:|...:||.                        |:|..:||:.:..     
  Fly   607 A------------PSSVKSSISK------------------------SVSVVNVTAARKF----- 630

  Fly   526 SQSQRQRSHHREHHRENHHNQSHHHMQQQQQHQNQQQQHQQHQQLQQQLQHTVGTPKMVPLLPIA 590
                                        ||:||.|::  :..:||:::...|.|.     :..::
  Fly   631 ----------------------------QQEHQKQRE--RDREQLKERTNSTQGV-----IRQLS 660

  Fly   591 STQIMAGNACQFPQPAYPLASPQLVAPTFLEP 622
            |....|..|.....||..|::.:  ||...:|
  Fly   661 SCLSEAETASCILSPASSLSASE--APDTPDP 690

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ClkNP_001014576.1 HLH 16..68 CDD:238036 19/57 (33%)
PAS 93..153 CDD:214512 14/59 (24%)
PAS 264..366 CDD:238075 27/106 (25%)
PAS_11 265..368 CDD:291273 27/107 (25%)
MetNP_001285132.1 HLH 38..87 CDD:238036 18/48 (38%)
PAS 137..>186 CDD:238075 12/49 (24%)
PAS_11 403..510 CDD:291273 29/117 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444970
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3561
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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