Sequence 1: | NP_001014576.1 | Gene: | Clk / 38872 | FlyBaseID: | FBgn0023076 | Length: | 1027 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017444554.1 | Gene: | Arntl / 29657 | RGDID: | 62003 | Length: | 633 | Species: | Rattus norvegicus |
Alignment Length: | 608 | Identity: | 152/608 - (25%) |
---|---|---|---|
Similarity: | 244/608 - (40%) | Gaps: | 166/608 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 DKDDTKSFL-----------CRKSRNLSEKKRRDQFNSLVNDLSALIST---SSRKMDKSTVLKS 57
Fly 58 TIAFLKNHNEATDRSKVFEIQQDWKPAFLSNDEYTHLMLESLDGFMMVFS-SMGSIFYASESITS 121
Fly 122 QLGYLPQDLYNMTIYDLAYEMD---------------HEALLNIFMNPTPV---IEPRQTDISSS 168
Fly 169 NQITFYTHLRRG---------------GMEKVDANAYELVKFVGYFRNDTNTSTGSSSEVSNGSN 218
Fly 219 GQPAVLPRIFQQNPNAEVDKKLVFVGTGRVQN---PQLIR-EMSIIDPTSNEFTSKHSMEWKFLF 279
Fly 280 LDHRAPPIIGYMPFEVLGTSGYDYYHFDDLDSIVACHEELRQTGE--GKSCYYRFLTKGQQWIWL 342
Fly 343 QTDYYVSYHQFNSKPDYVVCTHKVVSYAEVLKDSRKEGQKSGNSNSITNNGSSKVIASTGTSSKS 407
Fly 408 ASATTTLRDFELSSQNLDSTLLGNSLASLGTETAATSPAVDSSPMWSASAV-------------- 458
Fly 459 ---QPSGSCQINPLK-TSRP---ASSYG----------NISSTGISPKAKRKC--YFYNNRG--- 501
Fly 502 ------------NDSDSTSMSTD 512 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Clk | NP_001014576.1 | HLH | 16..68 | CDD:238036 | 20/54 (37%) |
PAS | 93..153 | CDD:214512 | 20/75 (27%) | ||
PAS | 264..366 | CDD:238075 | 37/103 (36%) | ||
PAS_11 | 265..368 | CDD:291273 | 37/104 (36%) | ||
Arntl | XP_017444554.1 | bHLH-PAS_ARNTL_PASD3 | 74..137 | CDD:381444 | 21/62 (34%) |
PAS | 156..215 | CDD:214512 | 18/58 (31%) | ||
PAS_11 | 346..448 | CDD:405306 | 36/102 (35%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3561 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |