Sequence 1: | NP_001014576.1 | Gene: | Clk / 38872 | FlyBaseID: | FBgn0023076 | Length: | 1027 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_032705.2 | Gene: | Ncoa3 / 17979 | MGIID: | 1276535 | Length: | 1403 | Species: | Mus musculus |
Alignment Length: | 1383 | Identity: | 284/1383 - (20%) |
---|---|---|---|
Similarity: | 442/1383 - (31%) | Gaps: | 550/1383 - (39%) |
- Green bases have known domain annotations that are detailed below.
Fly 24 EKKRRDQFNSLVNDLSALISTS-------SRKMDKSTVLKSTIAFLKNHNEATDRSKVFEIQQDW 81
Fly 82 KPAFLSN--------DEYTHLMLESLDGFMMVFSSMGSIFYASESITSQLGYLPQDLYNMTIYDL 138
Fly 139 AYEMDHEALLNIFMNPTPVI--------EPRQTDISSSNQITFYTHLRRGGMEKVDAN-----AY 190
Fly 191 ELVK--------------------------------------FVGYFRNDTNTSTGSSSEVSNGS 217
Fly 218 NGQPA-------VLPRIFQQNPNAEVDKKLVFVGT---GRVQNPQLIREMSIID----------- 261
Fly 262 ----PTSNE---FTSKHSMEWKFLFLDHR---------------APPIIG----YMPFEVLGTSG 300
Fly 301 YDYYHFDDLDSIVACHEELRQTGE------GKSCYYRFLTKGQQWIWLQTDYYVSYHQFNSKPDY 359
Fly 360 VVCTHKVVSYAEVLKDSRKEGQKSGNSN------SITNNGSSKVIA-----------------ST 401
Fly 402 GTSSKSASATTTLRDFELSSQNLDSTLLGNSLASLGTETAATSPAVDSSPMWSASAVQP---SGS 463
Fly 464 ---------CQINPLKTS--------RPA-----SSYGNISSTGISP---KAKRK------CYFY 497
Fly 498 NNRGNDSDSTSM-------STDSVTSRQSMMTH----VSSQSQRQRSHHREHHRENHHNQSHHHM 551
Fly 552 QQQ------------------------QQHQNQQQQHQQH-----------------QQLQQQL- 574
Fly 575 -------QHTVGT---------PK---------------MVPLL-----------------PIAS 591
Fly 592 TQIMAGNA---CQFPQPAYPLASPQLVAPTFLEPPQYLTAIPMQPVIA--PFPVAPVL--SPLPV 649
Fly 650 QSQ----TDMLPD-TVVMTPTQSQLQDQLQRKHDELQKLILQQQNELRIVSEQLLLSRYTYLQPM 709
Fly 710 MSMGFAPGNMTAAAVGNLGASGQRGL---NFTGSNAVQPQFNQYGFALNSEQMLNQQDQQMMMQQ 771
Fly 772 QQNLHTQHQHNLQQQHQSHSQLQQHTQQQHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLQ 836
Fly 837 LQ--------------------------------------QQNDILLREDIDDI----------- 852
Fly 853 DAFLNLSPLHSLGSQSTINPFNSSSN--------NNNQSYNGGSNLNNGNQ------------NN 897
Fly 898 NNRSSNPPQNNNEDSLLSCMQMATESSPSINFHMG-ISDDGS-ETQSEDNKMMH----------T 950
Fly 951 SGSNLVQQQQQQQQQQQILQQHQQQSNSFFSSNP--------------FLNSQNQNQNQLPNDLE 1001
Fly 1002 ILPYQMSQEQSQNLFNSP 1019 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Clk | NP_001014576.1 | HLH | 16..68 | CDD:238036 | 15/50 (30%) |
PAS | 93..153 | CDD:214512 | 21/59 (36%) | ||
PAS | 264..366 | CDD:238075 | 27/129 (21%) | ||
PAS_11 | 265..368 | CDD:291273 | 27/130 (21%) | ||
Ncoa3 | NP_032705.2 | bHLH_SF | 33..102 | CDD:381792 | 18/69 (26%) |
PAS | 117..172 | CDD:214512 | 20/54 (37%) | ||
PAS_11 | 262..372 | CDD:373151 | 21/120 (18%) | ||
NCOA_u2 | 451..564 | CDD:374708 | 30/126 (24%) | ||
SRC-1 | 608..696 | CDD:370145 | 21/88 (24%) | ||
DUF4927 | 714..801 | CDD:374467 | 10/86 (12%) | ||
Nuc_rec_co-act | 1056..1103 | CDD:312376 | 8/46 (17%) | ||
Med15 | 1094..>1398 | CDD:312941 | 37/179 (21%) | ||
DUF1518 | 1270..1326 | CDD:369380 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3561 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |