DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hn and TPH1

DIOPT Version :9

Sequence 1:NP_001261542.1 Gene:Hn / 38871 FlyBaseID:FBgn0001208 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_004170.1 Gene:TPH1 / 7166 HGNCID:12008 Length:444 Species:Homo sapiens


Alignment Length:431 Identity:232/431 - (53%)
Similarity:312/431 - (72%) Gaps:14/431 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 EARNTCLLFSPKDSSLSSGALANILAIFKKHDINLVHIESRSSLRVPG-YEFFVEADGKSGALGK 91
            |.....|:||.|:   ..|.|...|.||::..:||:|||||.|.|... :|.||:.|.....|..
Human    14 ERGRASLIFSLKN---EVGGLIKALKIFQEKHVNLLHIESRKSKRRNSEFEIFVDCDINREQLND 75

  Fly    92 AIEDVKEQCSYFNIISRDYKDNAT-------AVPWFPRRIRDLDRFANQILSYGSELDADHPGFT 149
            ....:|   |:.|::|.:..||.|       .|||||::|.|||..||::|.||||||||||||.
Human    76 IFHLLK---SHTNVLSVNLPDNFTLKEDGMETVPWFPKKISDLDHCANRVLMYGSELDADHPGFK 137

  Fly   150 DPEYRKRRKYFADIAYNYKHGEPLPHVDYTKEEIETWGIIFRNLTKLYKTHACREYNHVFPLLVD 214
            |..||||||||||:|.|||||:|:|.|::|:|||:|||.:|:.|.|||.|||||||....|||..
Human   138 DNVYRKRRKYFADLAMNYKHGDPIPKVEFTEEEIKTWGTVFQELNKLYPTHACREYLKNLPLLSK 202

  Fly   215 NCGFREDNIPQLEDVSNFLRDCTGFTLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPMYTPE 279
            .||:|||||||||||||||::.|||::|||||.||.||||:||||||||.|||:||.|.|.||||
Human   203 YCGYREDNIPQLEDVSNFLKERTGFSIRPVAGYLSPRDFLSGLAFRVFHCTQYVRHSSDPFYTPE 267

  Fly   280 PDVCHELMGHVPLFADPAFAQFSQEIGLASLGAPDDYIEKLSTIFWFTVEYGVCRQEGELKAYGA 344
            ||.||||:|||||.|:|:|||||||||||||||.::.::||:|.::||||:|:|:|:|:|:.:||
Human   268 PDTCHELLGHVPLLAEPSFAQFSQEIGLASLGASEEAVQKLATCYFFTVEFGLCKQDGQLRVFGA 332

  Fly   345 GLLSSYGELEYCLTDKPQLKDFEPEVTGVTKYPITQFQPLYYVADSFETAKEKTIKFANSIPRPF 409
            |||||..||::.|:...::|.|:|::|...:..||.||.:|:|::|||.||||..:|..:|.|||
Human   333 GLLSSISELKHALSGHAKVKPFDPKITCKQECLITTFQDVYFVSESFEDAKEKMREFTKTIKRPF 397

  Fly   410 GVRYNAYTQSVEVLDSKPQISNLMDNINSEFQILQNAVAKL 450
            ||:||.||:|:::|.....|::.|:.:..:..::.:|:||:
Human   398 GVKYNPYTRSIQILKDTKSITSAMNELQHDLDVVSDALAKV 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HnNP_001261542.1 Phe4hydrox_tetr 15..451 CDD:130335 232/431 (54%)
ACT_AAAH 32..107 CDD:153176 26/75 (35%)
Biopterin_H 118..447 CDD:278766 197/328 (60%)
TPH1NP_004170.1 Trp_5_monoox 3..439 CDD:130337 232/431 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 40 1.000 Domainoid score I12535
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54212
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000587
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100921
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
65.820

Return to query results.
Submit another query.