DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hn and pah

DIOPT Version :10

Sequence 1:NP_523963.2 Gene:Hn / 38871 FlyBaseID:FBgn0001208 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_001027484.1 Gene:pah / 613076 XenbaseID:XB-GENE-991085 Length:445 Species:Xenopus tropicalis


Alignment Length:114 Identity:27/114 - (23%)
Similarity:43/114 - (37%) Gaps:38/114 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 VASVSKQLDDLSDTLASTRKHLSQKLATLDWKVEEQNETSKMILSDVTEMRSSISQIGFDFKQLN 213
            :|:|.::     |:|...:||| :||... |..|:         |...|.|     .|:......
 Frog    57 IATVCRK-----DSLCPYKKHL-EKLKYC-WGYEK---------SCKPEFR-----FGYPVCSYV 100

  Fly   214 EMISGIEGKIESLESKQDV------------TLSGLWHLCQVAGVKDST 250
            :|     |..::|||.:|:            .|..:..|||.....||:
 Frog   101 DM-----GWTDTLESAEDIFWKQADFGYARERLEEMHVLCQPKETSDSS 144

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HnNP_523963.2 Phe4hydrox_tetr 15..451 CDD:130335 27/114 (24%)
pahNP_001027484.1 arom_aa_hydroxylase 22..445 CDD:470129 27/114 (24%)

Return to query results.
Submit another query.