DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hn and tph1b

DIOPT Version :9

Sequence 1:NP_001261542.1 Gene:Hn / 38871 FlyBaseID:FBgn0001208 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_001001843.2 Gene:tph1b / 415103 ZFINID:ZDB-GENE-030805-6 Length:480 Species:Danio rerio


Alignment Length:452 Identity:240/452 - (53%)
Similarity:321/452 - (71%) Gaps:14/452 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RQVSFDKPTRVEDSAYIVEGVDIKEARNTCLLFSPKDSSLSSGALANILAIFKKHDINLVHIESR 68
            |:.:|.|....:|...      ..:..:..::||.|:   ..|.|...|.:|:.:.:||:|||||
Zfish    32 RKTTFHKTDENKDKKL------SSKREHAAIVFSLKN---EVGGLVKALKLFQDNQVNLLHIESR 87

  Fly    69 SSLRVPG-YEFFVEADGKSGALGKAIEDVKEQCSYFNIISRDY----KDNATAVPWFPRRIRDLD 128
            .|.|... .|..|:.|.....|.:.::.:::|.|...:.|.|.    ..:.|.|||||::|.|||
Zfish    88 KSRRRNSELEVLVDCDSDRETLKEIVQLLRKQTSIIAMNSPDKFWTPASDLTEVPWFPKKISDLD 152

  Fly   129 RFANQILSYGSELDADHPGFTDPEYRKRRKYFADIAYNYKHGEPLPHVDYTKEEIETWGIIFRNL 193
            :.|.::|.||||||||||||.|..||||||||||:|.:||||:|:|||::|:||::|||::||.|
Zfish   153 KSACRVLMYGSELDADHPGFKDNVYRKRRKYFADLAMSYKHGDPIPHVEFTEEEVKTWGVVFREL 217

  Fly   194 TKLYKTHACREYNHVFPLLVDNCGFREDNIPQLEDVSNFLRDCTGFTLRPVAGLLSSRDFLAGLA 258
            .|||.|||||||....|||...||:||||||||||||||||:.||||:|||||.||.||||||||
Zfish   218 NKLYPTHACREYLQNLPLLSQFCGYREDNIPQLEDVSNFLRERTGFTIRPVAGYLSPRDFLAGLA 282

  Fly   259 FRVFHSTQYIRHPSKPMYTPEPDVCHELMGHVPLFADPAFAQFSQEIGLASLGAPDDYIEKLSTI 323
            |||||.|||:||.|.|:||||||.||||:|||||.|:|:|||||||:|||||||.||.::||:|.
Zfish   283 FRVFHCTQYVRHSSDPLYTPEPDTCHELLGHVPLLAEPSFAQFSQELGLASLGASDDAVQKLATC 347

  Fly   324 FWFTVEYGVCRQEGELKAYGAGLLSSYGELEYCLTDKPQLKDFEPEVTGVTKYPITQFQPLYYVA 388
            ::||||:|:|:|||.|:|||||||||..||::.|:|..::..|||:||...:..||.||.:|:|:
Zfish   348 YFFTVEFGLCKQEGSLRAYGAGLLSSISELKHSLSDSAKILPFEPKVTCKQECLITTFQDVYFVS 412

  Fly   389 DSFETAKEKTIKFANSIPRPFGVRYNAYTQSVEVLDSKPQISNLMDNINSEFQILQNAVAKL 450
            :|||.||.:..:||.:|.|||.:|||.|||||.||...|.|:::::.:..|..|:.:|:.:|
Zfish   413 ESFEEAKCRMREFAKTIQRPFSLRYNPYTQSVCVLKDMPSINDVVEELRHELDIVGDALCRL 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HnNP_001261542.1 Phe4hydrox_tetr 15..451 CDD:130335 237/441 (54%)
ACT_AAAH 32..107 CDD:153176 22/75 (29%)
Biopterin_H 118..447 CDD:278766 208/328 (63%)
tph1bNP_001001843.2 Trp_5_monoox 52..475 CDD:130337 236/426 (55%)
ACT_TPH 54..127 CDD:153201 22/75 (29%)
Biopterin_H 142..471 CDD:278766 208/328 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3186
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54212
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000587
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100921
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.720

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