DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hn and Trh

DIOPT Version :9

Sequence 1:NP_001261542.1 Gene:Hn / 38871 FlyBaseID:FBgn0001208 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_612080.1 Gene:Trh / 38121 FlyBaseID:FBgn0035187 Length:555 Species:Drosophila melanogaster


Alignment Length:420 Identity:212/420 - (50%)
Similarity:282/420 - (67%) Gaps:16/420 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 GALANILAIFKKHDINLVHIE-SRSSLRVPGYEFFVEADGKSGALGKAIEDVKEQCSYFNIISRD 109
            |.||..|.:|::..||::|:| |...:.....:..|:.:.....|.:.::.:..:.:..|..|.:
  Fly    90 GNLARALQVFQELGINVLHLELSPLEMATNQADVLVDVECDQRRLDQVVKMLNREVASVNYTSVN 154

  Fly   110 YKDNATA-------------VPWFPRRIRDLDRFANQILSYGSELDADHPGFTDPEYRKRRKYFA 161
            .:..|.|             :.||||:|.|||: |..:|.||||||||||||.||.|||||:.|:
  Fly   155 TQGLARAPSLSACSSFDFGDMVWFPRKISDLDK-AQNVLMYGSELDADHPGFKDPVYRKRREQFS 218

  Fly   162 DIAYNYKHGEPLPHVDYTKEEIETWGIIFRNLTKLYKTHACREYNHVFPLLVDNCGFREDNIPQL 226
            .||.|:|||.|:|.|.||.||::|||.:|..|.:||..||..||...:|.|...||:||||:|||
  Fly   219 AIANNFKHGNPIPRVQYTPEEVKTWGTVFLELHRLYVLHAVPEYMDNWPELEKYCGYREDNVPQL 283

  Fly   227 EDVSNFLRDCTGFTLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPMYTPEPDVCHELMGHVP 291
            :|||.:|:..|||.||||||.||.||||:||||||||.||||||.|.|.||||||.||||:||:|
  Fly   284 QDVSVYLKRKTGFQLRPVAGYLSPRDFLSGLAFRVFHCTQYIRHSSDPFYTPEPDCCHELLGHMP 348

  Fly   292 LFADPAFAQFSQEIGLASLGAPDDYIEKLSTIFWFTVEYGVCRQ-EGELKAYGAGLLSSYGELEY 355
            |.|:.:|||||||||||||||.|..||||:|:::||||:|:|:| :...|.||||||||..||::
  Fly   349 LLANSSFAQFSQEIGLASLGASDADIEKLATLYFFTVEFGLCKQADSTFKVYGAGLLSSVAELQH 413

  Fly   356 CLTDKPQLKDFEPEVTGVTKYPITQFQPLYYVADSFETAKEKTIKFANSIPRPFGVRYNAYTQSV 420
            .:|.:.::|.|:||||...:..||.:|..||..||||.|||:...||.||.||||||||.||.||
  Fly   414 AITAENKIKKFDPEVTCQQECIITSYQNAYYYTDSFEEAKEQMRAFAESIQRPFGVRYNPYTMSV 478

  Fly   421 EVLDSKPQISNLMDNINSEFQILQNAVAKL 450
            |||.:..:|:.::..:..:..|:.:|:.|:
  Fly   479 EVLSNAKKITAVVSELRGDLSIVCSALRKI 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HnNP_001261542.1 Phe4hydrox_tetr 15..451 CDD:130335 212/420 (50%)
ACT_AAAH 32..107 CDD:153176 13/61 (21%)
Biopterin_H 118..447 CDD:278766 194/329 (59%)
TrhNP_612080.1 Trp_5_monoox 34..509 CDD:130337 212/420 (50%)
ACT_TPH 79..152 CDD:153201 13/61 (21%)
Biopterin_H 177..506 CDD:278766 195/329 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449664
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3186
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000587
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100921
Panther 1 1.100 - - P PTHR11473
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.740

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