DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hn and tph1a

DIOPT Version :10

Sequence 1:NP_523963.2 Gene:Hn / 38871 FlyBaseID:FBgn0001208 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_840091.2 Gene:tph1a / 352943 ZFINID:ZDB-GENE-030317-1 Length:483 Species:Danio rerio


Alignment Length:454 Identity:238/454 - (52%)
Similarity:322/454 - (70%) Gaps:24/454 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QVSFDKPTRVEDSAYIVEGVDIKEARNTCLLFSPKDSSLSSGALANILAIFKKHDINLVHIESRS 69
            ::..:|..:.|.|          |.....::||.|:   ..|.|...|.:|:::.:||||||||.
Zfish    40 KIEENKDNKTESS----------ETGRAAVVFSLKN---EVGGLVKALKLFQENHVNLVHIESRK 91

  Fly    70 SLRVPG-YEFFVEADGKSGALGKAIEDVKEQCSYFNIISRDYKDNATA-------VPWFPRRIRD 126
            |.|... :|.||:.|.....|.:.|:.:::   :.|::..|..||...       |||||::|.|
Zfish    92 SKRRNSEFEIFVDCDSNREQLHEIIQLLRK---HVNVVEMDAPDNRLPEESEMENVPWFPKKISD 153

  Fly   127 LDRFANQILSYGSELDADHPGFTDPEYRKRRKYFADIAYNYKHGEPLPHVDYTKEEIETWGIIFR 191
            ||:.||::|.|||:||||||||.|..||||||||||:|.:||||:|:|.:::|:||::|||::||
Zfish   154 LDKCANRVLMYGSDLDADHPGFKDNVYRKRRKYFADLAMSYKHGDPIPRIEFTEEEVKTWGVVFR 218

  Fly   192 NLTKLYKTHACREYNHVFPLLVDNCGFREDNIPQLEDVSNFLRDCTGFTLRPVAGLLSSRDFLAG 256
            .|.|||.:||||||....|||:.:|..||||||||||||.||::.||||:|||||.||.||||||
Zfish   219 ELNKLYPSHACREYLKNLPLLIKHCDSREDNIPQLEDVSRFLKERTGFTIRPVAGYLSPRDFLAG 283

  Fly   257 LAFRVFHSTQYIRHPSKPMYTPEPDVCHELMGHVPLFADPAFAQFSQEIGLASLGAPDDYIEKLS 321
            |||||||.|||:||.|.|:||||||.||||:|||||.|:|:|||||||||||||||.||.|:||:
Zfish   284 LAFRVFHCTQYVRHSSDPLYTPEPDTCHELLGHVPLLAEPSFAQFSQEIGLASLGASDDSIQKLA 348

  Fly   322 TIFWFTVEYGVCRQEGELKAYGAGLLSSYGELEYCLTDKPQLKDFEPEVTGVTKYPITQFQPLYY 386
            |.::||||:|:|:|||:|:|||||||||..||::.|:...::..|:|.||...:..||.||.:|:
Zfish   349 TCYFFTVEFGLCKQEGKLRAYGAGLLSSISELKHALSGNARILPFDPNVTCKQECIITTFQDVYF 413

  Fly   387 VADSFETAKEKTIKFANSIPRPFGVRYNAYTQSVEVLDSKPQISNLMDNINSEFQILQNAVAKL 450
            ::||||.||.|..:||.:|.|||.||||.|||||:||.....|:|:::.:..|..|:.:|:::|
Zfish   414 MSDSFEEAKVKMREFAKTIKRPFSVRYNPYTQSVDVLKDTTSINNVVEELRHELDIIGDALSRL 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HnNP_523963.2 Phe4hydrox_tetr 15..451 CDD:130335 237/444 (53%)
tph1aNP_840091.2 Trp_5_monoox 50..478 CDD:130337 237/444 (53%)

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