DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hn and tph1a

DIOPT Version :9

Sequence 1:NP_001261542.1 Gene:Hn / 38871 FlyBaseID:FBgn0001208 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_840091.2 Gene:tph1a / 352943 ZFINID:ZDB-GENE-030317-1 Length:483 Species:Danio rerio


Alignment Length:454 Identity:238/454 - (52%)
Similarity:322/454 - (70%) Gaps:24/454 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QVSFDKPTRVEDSAYIVEGVDIKEARNTCLLFSPKDSSLSSGALANILAIFKKHDINLVHIESRS 69
            ::..:|..:.|.|          |.....::||.|:   ..|.|...|.:|:::.:||||||||.
Zfish    40 KIEENKDNKTESS----------ETGRAAVVFSLKN---EVGGLVKALKLFQENHVNLVHIESRK 91

  Fly    70 SLRVPG-YEFFVEADGKSGALGKAIEDVKEQCSYFNIISRDYKDNATA-------VPWFPRRIRD 126
            |.|... :|.||:.|.....|.:.|:.:::   :.|::..|..||...       |||||::|.|
Zfish    92 SKRRNSEFEIFVDCDSNREQLHEIIQLLRK---HVNVVEMDAPDNRLPEESEMENVPWFPKKISD 153

  Fly   127 LDRFANQILSYGSELDADHPGFTDPEYRKRRKYFADIAYNYKHGEPLPHVDYTKEEIETWGIIFR 191
            ||:.||::|.|||:||||||||.|..||||||||||:|.:||||:|:|.:::|:||::|||::||
Zfish   154 LDKCANRVLMYGSDLDADHPGFKDNVYRKRRKYFADLAMSYKHGDPIPRIEFTEEEVKTWGVVFR 218

  Fly   192 NLTKLYKTHACREYNHVFPLLVDNCGFREDNIPQLEDVSNFLRDCTGFTLRPVAGLLSSRDFLAG 256
            .|.|||.:||||||....|||:.:|..||||||||||||.||::.||||:|||||.||.||||||
Zfish   219 ELNKLYPSHACREYLKNLPLLIKHCDSREDNIPQLEDVSRFLKERTGFTIRPVAGYLSPRDFLAG 283

  Fly   257 LAFRVFHSTQYIRHPSKPMYTPEPDVCHELMGHVPLFADPAFAQFSQEIGLASLGAPDDYIEKLS 321
            |||||||.|||:||.|.|:||||||.||||:|||||.|:|:|||||||||||||||.||.|:||:
Zfish   284 LAFRVFHCTQYVRHSSDPLYTPEPDTCHELLGHVPLLAEPSFAQFSQEIGLASLGASDDSIQKLA 348

  Fly   322 TIFWFTVEYGVCRQEGELKAYGAGLLSSYGELEYCLTDKPQLKDFEPEVTGVTKYPITQFQPLYY 386
            |.::||||:|:|:|||:|:|||||||||..||::.|:...::..|:|.||...:..||.||.:|:
Zfish   349 TCYFFTVEFGLCKQEGKLRAYGAGLLSSISELKHALSGNARILPFDPNVTCKQECIITTFQDVYF 413

  Fly   387 VADSFETAKEKTIKFANSIPRPFGVRYNAYTQSVEVLDSKPQISNLMDNINSEFQILQNAVAKL 450
            ::||||.||.|..:||.:|.|||.||||.|||||:||.....|:|:::.:..|..|:.:|:::|
Zfish   414 MSDSFEEAKVKMREFAKTIKRPFSVRYNPYTQSVDVLKDTTSINNVVEELRHELDIIGDALSRL 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HnNP_001261542.1 Phe4hydrox_tetr 15..451 CDD:130335 237/444 (53%)
ACT_AAAH 32..107 CDD:153176 24/75 (32%)
Biopterin_H 118..447 CDD:278766 204/328 (62%)
tph1aNP_840091.2 Trp_5_monoox 50..478 CDD:130337 237/444 (53%)
ACT_TPH 57..130 CDD:153201 24/78 (31%)
Biopterin_H 145..475 CDD:278766 205/329 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3186
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54212
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000587
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100921
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.720

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