DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hn and Th

DIOPT Version :10

Sequence 1:NP_523963.2 Gene:Hn / 38871 FlyBaseID:FBgn0001208 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_036872.1 Gene:Th / 25085 RGDID:3853 Length:498 Species:Rattus norvegicus


Alignment Length:422 Identity:212/422 - (50%)
Similarity:292/422 - (69%) Gaps:14/422 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LLFSPKDSSLSSGALANILAIFKKHDINLVHIESRSSLR----VPGYEFFVEADGKSGALGKAIE 94
            ||||.:.:..||  |:..:.:|:..:..:.|:|:|.:.|    .|..|:||..:..||.|...:.
  Rat    85 LLFSLRGTKPSS--LSRAVKVFETFEAKIHHLETRPAQRPLAGSPHLEYFVRFEVPSGDLAALLS 147

  Fly    95 DVKEQCSYFNIISRDYKD-NATAVPWFPRRIRDLDRFANQILSYGSELDADHPGFTDPEYRKRRK 158
            .|:.       :|.|.:. ....||||||::.:||:..:.:..:..:||.|||||:|..||:|||
  Rat   148 SVRR-------VSDDVRSAREDKVPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRK 205

  Fly   159 YFADIAYNYKHGEPLPHVDYTKEEIETWGIIFRNLTKLYKTHACREYNHVFPLLVDNCGFREDNI 223
            ..|:||:.||||||:|||:||.|||.||..::..|..||.||||||:...|.||...||:|||:|
  Rat   206 LIAEIAFQYKHGEPIPHVEYTAEEIATWKEVYVTLKGLYATHACREHLEGFQLLERYCGYREDSI 270

  Fly   224 PQLEDVSNFLRDCTGFTLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPMYTPEPDVCHELMG 288
            |||||||.||::.|||.|||||||||:|||||.||||||..||||||.|.||::||||.||||:|
  Rat   271 PQLEDVSRFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELLG 335

  Fly   289 HVPLFADPAFAQFSQEIGLASLGAPDDYIEKLSTIFWFTVEYGVCRQEGELKAYGAGLLSSYGEL 353
            |||:.||..||||||:||||||||.|:.||||||::|||||:|:|:|.|||||||||||||||||
  Rat   336 HVPMLADRTFAQFSQDIGLASLGASDEEIEKLSTVYWFTVEFGLCKQNGELKAYGAGLLSSYGEL 400

  Fly   354 EYCLTDKPQLKDFEPEVTGVTKYPITQFQPLYYVADSFETAKEKTIKFANSIPRPFGVRYNAYTQ 418
            .:.|:::|:::.|:|:...|..|....:||:|:|::||..||:|...:|:.|.|||.|:::.||.
  Rat   401 LHSLSEEPEVRAFDPDTAAVQPYQDQTYQPVYFVSESFNDAKDKLRNYASRIQRPFSVKFDPYTL 465

  Fly   419 SVEVLDSKPQISNLMDNINSEFQILQNAVAKL 450
            :::||||...|...::.:..|...|.:|::.:
  Rat   466 AIDVLDSPHTIQRSLEGVQDELHTLAHALSAI 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HnNP_523963.2 Phe4hydrox_tetr 15..451 CDD:130335 212/422 (50%)
ThNP_036872.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31
TOH_N 2..26 CDD:403668
ACT_TH 38..158 CDD:153202 22/81 (27%)
Biopterin_H 165..495 CDD:459776 189/329 (57%)
Blue background indicates that the domain is not in the aligned region.

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