DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hn and Pah

DIOPT Version :10

Sequence 1:NP_523963.2 Gene:Hn / 38871 FlyBaseID:FBgn0001208 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_036751.2 Gene:Pah / 24616 RGDID:3248 Length:453 Species:Rattus norvegicus


Alignment Length:440 Identity:278/440 - (63%)
Similarity:340/440 - (77%) Gaps:10/440 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 EDSAYIVEGVDIKEARNTCLLFSPKDSSLSSGALANILAIFKKHDINLVHIESR-SSLRVPGYEF 78
            ::::||.:..:...|  ..|:||.|:   ..||||.:|.:|:::||||.||||| |.|....|||
  Rat    20 QETSYIEDNSNQNGA--ISLIFSLKE---EVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEF 79

  Fly    79 FVEADGKS-GALGKAIEDVKEQC-SYFNIISRDYKDNATAVPWFPRRIRDLDRFANQILSYGSEL 141
            |...|.:| ..||..|:.::... :..:.:|||.:.|  .||||||.|::||||||||||||:||
  Rat    80 FTYLDKRSKPVLGSIIKSLRNDIGATVHELSRDKEKN--TVPWFPRTIQELDRFANQILSYGAEL 142

  Fly   142 DADHPGFTDPEYRKRRKYFADIAYNYKHGEPLPHVDYTKEEIETWGIIFRNLTKLYKTHACREYN 206
            |||||||.||.||.|||.||||||||:||:|:|.|:||:||.:|||.:||.|..|||||||.|:|
  Rat   143 DADHPGFKDPVYRARRKQFADIAYNYRHGQPIPRVEYTEEEKQTWGTVFRTLKALYKTHACYEHN 207

  Fly   207 HVFPLLVDNCGFREDNIPQLEDVSNFLRDCTGFTLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHP 271
            |:||||...|||||||||||||||.||:.||||.||||||||||||||.||||||||.||||||.
  Rat   208 HIFPLLEKYCGFREDNIPQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHG 272

  Fly   272 SKPMYTPEPDVCHELMGHVPLFADPAFAQFSQEIGLASLGAPDDYIEKLSTIFWFTVEYGVCRQE 336
            ||||||||||:||||:||||||:|.:|||||||||||||||||:|||||:||:|||||:|:|::.
  Rat   273 SKPMYTPEPDICHELLGHVPLFSDRSFAQFSQEIGLASLGAPDEYIEKLATIYWFTVEFGLCKEG 337

  Fly   337 GELKAYGAGLLSSYGELEYCLTDKPQLKDFEPEVTGVTKYPITQFQPLYYVADSFETAKEKTIKF 401
            ..:||||||||||:|||:|||:|||:|...|.|.....:|.:|:||||||||:||..||||...|
  Rat   338 DSIKAYGAGLLSSFGELQYCLSDKPKLLPLELEKIACQEYSVTEFQPLYYVAESFSDAKEKVRTF 402

  Fly   402 ANSIPRPFGVRYNAYTQSVEVLDSKPQISNLMDNINSEFQILQNAVAKLR 451
            |.:|||||.|||:.|||.|||||:..|:..|.|:||||..||.||:.|::
  Rat   403 AATIPRPFSVRYDPYTQRVEVLDNTQQLKILADSINSEVGILCNALQKIK 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HnNP_523963.2 Phe4hydrox_tetr 15..451 CDD:130335 278/438 (63%)
PahNP_036751.2 Phe4hydrox_tetr 20..452 CDD:130335 278/438 (63%)

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