DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hn and Pah

DIOPT Version :9

Sequence 1:NP_001261542.1 Gene:Hn / 38871 FlyBaseID:FBgn0001208 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_032803.2 Gene:Pah / 18478 MGIID:97473 Length:453 Species:Mus musculus


Alignment Length:440 Identity:277/440 - (62%)
Similarity:341/440 - (77%) Gaps:10/440 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 EDSAYIVEGVDIKEARNTCLLFSPKDSSLSSGALANILAIFKKHDINLVHIESR-SSLRVPGYEF 78
            ::::||.:..:...|  ..|:||.|:   ..||||.:|.:|::::|||.||||| |.|....|||
Mouse    20 QETSYIEDNSNQNGA--VSLIFSLKE---EVGALAKVLRLFEENEINLTHIESRPSRLNKDEYEF 79

  Fly    79 FVEADGKS-GALGKAIEDVKEQC-SYFNIISRDYKDNATAVPWFPRRIRDLDRFANQILSYGSEL 141
            |...|.:| ..||..|:.::... :..:.:|||.:.|  .||||||.|::||||||||||||:||
Mouse    80 FTYLDKRSKPVLGSIIKSLRNDIGATVHELSRDKEKN--TVPWFPRTIQELDRFANQILSYGAEL 142

  Fly   142 DADHPGFTDPEYRKRRKYFADIAYNYKHGEPLPHVDYTKEEIETWGIIFRNLTKLYKTHACREYN 206
            |||||||.||.||.|||.||||||||:||:|:|.|:||:||.:|||.:||.|..|||||||.|:|
Mouse   143 DADHPGFKDPVYRARRKQFADIAYNYRHGQPIPRVEYTEEERKTWGTVFRTLKALYKTHACYEHN 207

  Fly   207 HVFPLLVDNCGFREDNIPQLEDVSNFLRDCTGFTLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHP 271
            |:||||...|||||||||||||||.||:.||||.||||||||||||||.||||||||.||||||.
Mouse   208 HIFPLLEKYCGFREDNIPQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHG 272

  Fly   272 SKPMYTPEPDVCHELMGHVPLFADPAFAQFSQEIGLASLGAPDDYIEKLSTIFWFTVEYGVCRQE 336
            ||||||||||:||||:||||||:|.:|||||||||||||||||:|||||:||:|||||:|:|::.
Mouse   273 SKPMYTPEPDICHELLGHVPLFSDRSFAQFSQEIGLASLGAPDEYIEKLATIYWFTVEFGLCKEG 337

  Fly   337 GELKAYGAGLLSSYGELEYCLTDKPQLKDFEPEVTGVTKYPITQFQPLYYVADSFETAKEKTIKF 401
            ..:||||||||||:|||:|||:|||:|...|.|.|...:|.:|:||||||||:||..||||...|
Mouse   338 DSIKAYGAGLLSSFGELQYCLSDKPKLLPLELEKTACQEYTVTEFQPLYYVAESFNDAKEKVRTF 402

  Fly   402 ANSIPRPFGVRYNAYTQSVEVLDSKPQISNLMDNINSEFQILQNAVAKLR 451
            |.:|||||.|||:.|||.|||||:..|:..|.|:||||..||.:|:.|::
Mouse   403 AATIPRPFSVRYDPYTQRVEVLDNTQQLKILADSINSEVGILCHALQKIK 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HnNP_001261542.1 Phe4hydrox_tetr 15..451 CDD:130335 277/438 (63%)
ACT_AAAH 32..107 CDD:153176 29/77 (38%)
Biopterin_H 118..447 CDD:278766 238/328 (73%)
PahNP_032803.2 Phe4hydrox_tetr 20..452 CDD:130335 277/438 (63%)
ACT_PAH 21..110 CDD:153203 32/93 (34%)
Biopterin_H 119..449 CDD:278766 239/329 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837665
Domainoid 1 1.000 510 1.000 Domainoid score I323
eggNOG 1 0.900 - - E1_COG3186
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H234
Inparanoid 1 1.050 553 1.000 Inparanoid score I1118
Isobase 1 0.950 - 0 Normalized mean entropy S2400
OMA 1 1.010 - - QHG54212
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000587
OrthoInspector 1 1.000 - - oto92814
orthoMCL 1 0.900 - - OOG6_100921
Panther 1 1.100 - - LDO PTHR11473
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3415
SonicParanoid 1 1.000 - - X6360
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.740

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