DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hn and pah-1

DIOPT Version :9

Sequence 1:NP_001261542.1 Gene:Hn / 38871 FlyBaseID:FBgn0001208 Length:452 Species:Drosophila melanogaster
Sequence 2:NP_001254185.1 Gene:pah-1 / 174401 WormBaseID:WBGene00000240 Length:457 Species:Caenorhabditis elegans


Alignment Length:443 Identity:254/443 - (57%)
Similarity:334/443 - (75%) Gaps:19/443 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 AYIVE-GVDIKEARNTCLLFSPKDSSLSSGALANILAIFKKHDINLVHIESRSSLRVPG-YEFFV 80
            :|:.: ..||.:   |.::|:.::   .:||||..|.:|:.||:||.|||||.|....| ||..|
 Worm    18 SYVADVNADIGK---TTIVFTLRE---KAGALAETLKLFQAHDVNLSHIESRPSKTHEGCYEVLV 76

  Fly    81 E-ADGKSGALGKAIEDVKE---QCSYFNIISRDY----KDNATAVPWFPRRIRDLDRFANQILSY 137
            | |:.:.   .:.||.|.|   |.:...::.:|:    |.|..:|||||::|.|:|:|||:||||
 Worm    77 EFAEAED---HRKIEGVIEHFQQKAEKKVLVQDWNTKNKQNKDSVPWFPQKINDIDQFANRILSY 138

  Fly   138 GSELDADHPGFTDPEYRKRRKYFADIAYNYKHGEPLPHVDYTKEEIETWGIIFRNLTKLYKTHAC 202
            |:|||||||||.|..||:|||:|||||:|:|||:.:|.:.||.|||.||..::..||.:|..:||
 Worm   139 GAELDADHPGFKDMTYRERRKFFADIAFNFKHGDKIPTITYTDEEIATWRTVYNELTVMYPKNAC 203

  Fly   203 REYNHVFPLLVDNCGFREDNIPQLEDVSNFLRDCTGFTLRPVAGLLSSRDFLAGLAFRVFHSTQY 267
            :|:|::||||..||||..|.||||:|||:||:||||:|:||||||||||||||||||||||||||
 Worm   204 QEFNYIFPLLQQNCGFGPDRIPQLQDVSDFLKDCTGYTIRPVAGLLSSRDFLAGLAFRVFHSTQY 268

  Fly   268 IRHPSKPMYTPEPDVCHELMGHVPLFADPAFAQFSQEIGLASLGAPDDYIEKLSTIFWFTVEYGV 332
            |||.|.|.||||||:||||:||||||||..||||||||||||||||||.||||:|::|||:|:|:
 Worm   269 IRHHSAPKYTPEPDICHELLGHVPLFADVEFAQFSQEIGLASLGAPDDVIEKLATLYWFTIEFGI 333

  Fly   333 CRQEGELKAYGAGLLSSYGELEYCLTDKPQLKDFEPEVTGVTKYPITQFQPLYYVADSFETAKEK 397
            |:|:||.||||||||||:|||:|.|:|||::.||:|.|..|||||||::||.|::|:||.:||.|
 Worm   334 CQQDGEKKAYGAGLLSSFGELQYALSDKPEVVDFDPAVCCVTKYPITEYQPKYFLAESFASAKNK 398

  Fly   398 TIKFANSIPRPFGVRYNAYTQSVEVLDSKPQISNLMDNINSEFQILQNAVAKL 450
            ...:|.:|.|||.:|||||||.||:||....:..|..:|.|:...|:.|:.|:
 Worm   399 LKSWAATINRPFQIRYNAYTQRVEILDKVAALQRLARDIRSDISTLEEALGKV 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HnNP_001261542.1 Phe4hydrox_tetr 15..451 CDD:130335 254/443 (57%)
ACT_AAAH 32..107 CDD:153176 29/79 (37%)
Biopterin_H 118..447 CDD:278766 216/328 (66%)
pah-1NP_001254185.1 Phe4hydrox_tetr 15..452 CDD:130335 254/443 (57%)
ACT_AAAH 30..99 CDD:153176 29/74 (39%)
Biopterin_H 119..448 CDD:278766 216/328 (66%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159584
Domainoid 1 1.000 480 1.000 Domainoid score I202
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H234
Inparanoid 1 1.050 515 1.000 Inparanoid score I700
Isobase 1 0.950 - 0 Normalized mean entropy S2400
OMA 1 1.010 - - QHG54212
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000587
OrthoInspector 1 1.000 - - oto17440
orthoMCL 1 0.900 - - OOG6_100921
Panther 1 1.100 - - LDO PTHR11473
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3415
SonicParanoid 1 1.000 - - X6360
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.840

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