DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hn and tph2

DIOPT Version :9

Sequence 1:NP_001261542.1 Gene:Hn / 38871 FlyBaseID:FBgn0001208 Length:452 Species:Drosophila melanogaster
Sequence 2:XP_002940217.3 Gene:tph2 / 100486097 XenbaseID:XB-GENE-958329 Length:485 Species:Xenopus tropicalis


Alignment Length:462 Identity:228/462 - (49%)
Similarity:317/462 - (68%) Gaps:39/462 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QVSFDKPTRVEDSAYIVEGVDIKEARNTCLLFSPKDSSLSSGALANILAIFKKHDINLVHIESRS 69
            ::..:|.::.|.:|         |...|.::.:.|:   ..|.|...|.|||:..:|::|||||.
 Frog    41 RIDENKCSKTEATA---------ETERTAVILTMKN---EVGGLLQNLKIFKEKYVNIIHIESRK 93

  Fly    70 SL-RVPGYEFFVEADGKSGALGKAIEDVKEQCSYF-------------NIISRDYK--DNATAVP 118
            |. .....:.:||           .|..|::|...             |.:.|.::  :....|.
 Frog    94 SKGNKSEVDMYVE-----------FECTKKKCQELQHLLKLQSGIISVNPVERIWRKDEELEGVL 147

  Fly   119 WFPRRIRDLDRFANQILSYGSELDADHPGFTDPEYRKRRKYFADIAYNYKHGEPLPHVDYTKEEI 183
            ||||:|.:||:.:|::|.||||||||||||.|..||:|||||.|:|.:||:|:|:|.|:||.|||
 Frog   148 WFPRKISELDKCSNRVLMYGSELDADHPGFKDNVYRQRRKYFVDVAMDYKYGQPIPRVEYTAEEI 212

  Fly   184 ETWGIIFRNLTKLYKTHACREYNHVFPLLVDNCGFREDNIPQLEDVSNFLRDCTGFTLRPVAGLL 248
            :|||.:|:.|||||.||||:||....|||...||:||||:||||||:.||::.:|||:|||||.|
 Frog   213 KTWGTVFKELTKLYPTHACKEYLKNLPLLTKYCGYREDNVPQLEDVAIFLKERSGFTVRPVAGYL 277

  Fly   249 SSRDFLAGLAFRVFHSTQYIRHPSKPMYTPEPDVCHELMGHVPLFADPAFAQFSQEIGLASLGAP 313
            |.||||||||:||||.||||||.|.|:||||||.||||:|||||.|||.|||||||||||||||.
 Frog   278 SPRDFLAGLAYRVFHCTQYIRHGSDPLYTPEPDTCHELLGHVPLLADPKFAQFSQEIGLASLGAS 342

  Fly   314 DDYIEKLSTIFWFTVEYGVCRQEGELKAYGAGLLSSYGELEYCLTDKPQLKDFEPEVTGVTKYPI 378
            |:.::||:|.::||:|:|:|:|:|:|:|||||||||.|||::.|:||..:|.|:|:.|.:.:..|
 Frog   343 DEDVQKLATCYFFTIEFGLCKQDGQLRAYGAGLLSSIGELKHALSDKAIVKTFDPKTTCLQECII 407

  Fly   379 TQFQPLYYVADSFETAKEKTIKFANSIPRPFGVRYNAYTQSVEVLDSKPQISNLMDNINSEFQIL 443
            |.||..|:|::||:.||||..:||.||.|||.|.:|.||||:|:|::...|.|::.::.|:...:
 Frog   408 TTFQDSYFVSESFDEAKEKMREFAKSINRPFSVYFNPYTQSIEILNNTRSIENVIQDLRSDLNTV 472

  Fly   444 QNAVAKL 450
            .:|:||:
 Frog   473 SDALAKM 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HnNP_001261542.1 Phe4hydrox_tetr 15..451 CDD:130335 227/452 (50%)
ACT_AAAH 32..107 CDD:153176 21/88 (24%)
Biopterin_H 118..447 CDD:278766 198/328 (60%)
tph2XP_002940217.3 ACT 59..132 CDD:415594 20/86 (23%)
Biopterin_H 148..476 CDD:395280 198/327 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54212
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000587
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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