DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7409 and Hspb6

DIOPT Version :10

Sequence 1:NP_648155.1 Gene:CG7409 / 38870 FlyBaseID:FBgn0035817 Length:154 Species:Drosophila melanogaster
Sequence 2:XP_063135425.1 Gene:Hspb6 / 192245 RGDID:621554 Length:190 Species:Rattus norvegicus


Alignment Length:128 Identity:39/128 - (30%)
Similarity:55/128 - (42%) Gaps:31/128 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 PYWKRSLSRVGSAPDLSRVIVGKDGFEANVDVHLFKPYEISVKTSGDTVVVEAKHEKR------- 90
            ||:.|:.|   .|...::|......|...:||..|.|.|||||..||.|.|.|:||:|       
  Rat    52 PYYLRAPS---VALPTAQVPTDPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERPVGLLAR 113

  Fly    91 ---------------------RDGDTFVGRHIVKRFVLPRGYYPNDVRSELSSDGILTVKCPP 132
                                 :|...|:.|...:|:.||.|..|..|.|.||.:|:|:::..|
  Rat   114 LGSRGKQEGRILKPISSPPHSQDEHGFIAREFHRRYRLPPGVDPAAVTSALSPEGVLSIQATP 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7409NP_648155.1 metazoan_ACD 54..131 CDD:107247 32/104 (31%)
Hspb6XP_063135425.1 None

Return to query results.
Submit another query.