DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7409 and hsp-43

DIOPT Version :10

Sequence 1:NP_648155.1 Gene:CG7409 / 38870 FlyBaseID:FBgn0035817 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_001123107.2 Gene:hsp-43 / 180895 WormBaseID:WBGene00002024 Length:393 Species:Caenorhabditis elegans


Alignment Length:170 Identity:46/170 - (27%)
Similarity:71/170 - (41%) Gaps:42/170 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DWDYWDYRRRLWRDWDLNDWDL----------------------PYWKRSLSRVGSAP------D 47
            |.|.|      |:||. .||..                      |||.....| .:.|      |
 Worm    46 DVDSW------WKDWP-TDWPRMDAVMPRFSSQLDRMDRNWRSDPYWMNLYPR-WAEPIFKEGID 102

  Fly    48 LSRVIVGKD-GFEANVDVHLFKPYEISVKTSGDTVVVEAKHEKRRDGDTFVGRHIVKRFVLPRGY 111
            ::..:|..| .|..::|.:.|:|.||.|||..||:::|.:||..||.|.|...:.|:::.|||..
 Worm   103 VNSNVVNDDRRFAVDMDCYQFRPEEIQVKTLDDTLMIEGRHEDIRDKDNFTKMYFVRKYQLPRDV 167

  Fly   112 YPNDVRSELSSDGILTVKCPPYLT-----NERSVYVRQVG 146
            ..|.::|.:.:.|.|.|:...:..     .||.:.:...|
 Worm   168 DFNSIQSSIDAKGRLQVEAGKFNNMALQGRERMIPIEGAG 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7409NP_648155.1 metazoan_ACD 54..131 CDD:107247 28/77 (36%)
hsp-43NP_001123107.2 metazoan_ACD 107..186 CDD:107247 29/78 (37%)

Return to query results.
Submit another query.