DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7409 and hsp30d

DIOPT Version :10

Sequence 1:NP_648155.1 Gene:CG7409 / 38870 FlyBaseID:FBgn0035817 Length:154 Species:Drosophila melanogaster
Sequence 2:XP_002937646.1 Gene:hsp30d / 100489362 XenbaseID:XB-GENE-5917036 Length:215 Species:Xenopus tropicalis


Alignment Length:118 Identity:40/118 - (33%)
Similarity:55/118 - (46%) Gaps:7/118 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 RRLWRDWDLND-WDLPYWKRSLSRVGSAPDLSRVIVGKDGFEANVDVHLFKPYEISVKTSGDTVV 82
            |.|.:|.|:.. .|.....|:....|::|...:  .|||.||..:||..|.|:|::||..|..|:
 Frog    58 RLLSQDMDMRRITDQSRQPRAAETEGTSPSSGK--DGKDHFELTLDVRDFSPHELTVKMQGRRVI 120

  Fly    83 VEAKHEKR---RDGDTFVGRHIVKRFV-LPRGYYPNDVRSELSSDGILTVKCP 131
            |..|.|::   .||..|......||.. ||.|..|..|....|.||.|.::.|
 Frog   121 VTGKQERKSDSEDGSYFHEYREWKREAELPEGVNPEQVVCSFSKDGHLHIQAP 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7409NP_648155.1 metazoan_ACD 54..131 CDD:107247 31/80 (39%)
hsp30dXP_002937646.1 ACD_HspB9_like 88..174 CDD:107236 32/88 (36%)

Return to query results.
Submit another query.