DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7409 and hsp30d

DIOPT Version :9

Sequence 1:NP_648155.1 Gene:CG7409 / 38870 FlyBaseID:FBgn0035817 Length:154 Species:Drosophila melanogaster
Sequence 2:XP_002937646.1 Gene:hsp30d / 100489362 XenbaseID:XB-GENE-5917036 Length:215 Species:Xenopus tropicalis


Alignment Length:118 Identity:40/118 - (33%)
Similarity:55/118 - (46%) Gaps:7/118 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 RRLWRDWDLND-WDLPYWKRSLSRVGSAPDLSRVIVGKDGFEANVDVHLFKPYEISVKTSGDTVV 82
            |.|.:|.|:.. .|.....|:....|::|...:  .|||.||..:||..|.|:|::||..|..|:
 Frog    58 RLLSQDMDMRRITDQSRQPRAAETEGTSPSSGK--DGKDHFELTLDVRDFSPHELTVKMQGRRVI 120

  Fly    83 VEAKHEKR---RDGDTFVGRHIVKRFV-LPRGYYPNDVRSELSSDGILTVKCP 131
            |..|.|::   .||..|......||.. ||.|..|..|....|.||.|.::.|
 Frog   121 VTGKQERKSDSEDGSYFHEYREWKREAELPEGVNPEQVVCSFSKDGHLHIQAP 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7409NP_648155.1 metazoan_ACD 54..131 CDD:107247 31/80 (39%)
hsp30dXP_002937646.1 ACD_HspB9_like 88..174 CDD:107236 32/88 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 72 1.000 Inparanoid score I5129
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

Return to query results.
Submit another query.