DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snmp2 and CG10345

DIOPT Version :10

Sequence 1:NP_001163372.1 Gene:Snmp2 / 38868 FlyBaseID:FBgn0035815 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_650563.2 Gene:CG10345 / 42017 FlyBaseID:FBgn0027562 Length:552 Species:Drosophila melanogaster


Alignment Length:561 Identity:107/561 - (19%)
Similarity:223/561 - (39%) Gaps:119/561 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SALGVCVAVLGGYCGWILFPNMVHKKVEQSVVIQDGSEQFKRFVNLPQPLNFKVYIFNVTNSDRI 73
            :|||:.:...|..   ::..:.:...::..:.::.|:...:.::..|..:...||:||.||.|..
  Fly    18 AALGMTLLFFGSL---VIISDPLQSILDTQLSLKPGTLLHRLWLLPPLDVYINVYMFNYTNVDEF 79

  Fly    74 QQGAIP--IVEEIGPYVYKQFRQKKVKHFSRDGSKISYVQNVHFDFDAVASAPYTQDDRIVALNM 136
            ..|...  .::|:||||||:........::...:.|:|.....:.|     ||            
  Fly    80 TSGRASKLQLQEVGPYVYKEVLSNHNVTYNESNNTITYSPKREYVF-----AP------------ 127

  Fly   137 HMNAFLQVFEREITDIFQGFANRLNSRLNQTPGVRVLKRLMERIRGKRKSVLQISENDPGLALL- 200
                     ||.:.|                |.:       :|||.....::.::.....|::. 
  Fly   128 ---------ERSVGD----------------PKI-------DRIRAPNIPLMGVTTLASSLSMFA 160

  Fly   201 LVHLNANLKAVFNDPRSMFVSTSVREYLFDGVRFCINPQGIAKAICNQIKESGSKTIREKSDGSL 265
            .:.|:|..:.:.:.|   .:..||.:|:: |..             :.:.|..|:.:....|   
  Fly   161 ALGLSAITRQLNSQP---MLEMSVHDYMW-GYE-------------DHLVELASRFVPNWID--- 205

  Fly   266 AFSFFG-----HKNGSGHEVYEVHTGK---------GDPMRVLEIQKLDDSHNLQVW-LNASSEG 315
             ||.||     .:.|:...|:.::..:         .|..|...:..::.....:.| .|..:.|
  Fly   206 -FSSFGIMEKLFREGNESNVFNMNLPEPKDKYGMRMTDAPRGYTVDSINGERGFKGWQYNEETNG 269

  Fly   316 ETSVCNQINGT-DASAYPPFRQRGDSMYIFSADICRSVQLFYQTDIQYQGIPGYRYSIGENFIND 379
              ::||:|.|: ||:.:|......|..:::....||.:.:.:.....:.|:..:.:.:..:..:.
  Fly   270 --TMCNRIWGSHDATLFPLDMDENDEFFLYRRTFCRRLPVKFNRTTTFNGLDAFEFVMEPDSFDS 332

  Fly   380 IGPEHDNECFCVDKLANVIKRKNGCLYAGALDLTTC-LDAPVILTLPHMLGASNEYRKMIRGLKP 443
            .....::.|:|         :.|.||..|..:::.| .:.|:.:|.||.:.|.....:...||:|
  Fly   333 EVDNANSSCYC---------KNNRCLKKGVGNVSPCYYNIPLAITYPHFMHADPSLLEPFDGLQP 388

  Fly   444 DAKKH-QTFVDVQSLTGTPLQGGK-RVQFNMFLKSINRIGITENLPTVLMPAIWVEEGIQLNGEM 506
            :..:. .||| ||...|.|:||.. |:|.|..:..:|...:......:::|.:||:    ||.::
  Fly   389 NVSRFTSTFV-VQPQLGAPMQGTHLRLQANQVVGKVNFNRMMTPFENMILPLLWVD----LNIDV 448

  Fly   507 VAFFKKKLINTLK-TLNIVHWATLCGGIGVAVACLIYYIYQ 546
            :....:.||:.:| ...::.|:       .|:..|:..:||
  Fly   449 LCLTLRLLIHGIKWGFPLLQWS-------AALGMLLAGVYQ 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snmp2NP_001163372.1 CD36 10..543 CDD:460076 105/555 (19%)
CG10345NP_650563.2 CD36 19..490 CDD:460076 107/560 (19%)

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