DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snmp2 and CG31741

DIOPT Version :10

Sequence 1:NP_001163372.1 Gene:Snmp2 / 38868 FlyBaseID:FBgn0035815 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_724088.2 Gene:CG31741 / 35079 FlyBaseID:FBgn0051741 Length:491 Species:Drosophila melanogaster


Alignment Length:479 Identity:103/479 - (21%)
Similarity:176/479 - (36%) Gaps:132/479 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IVSALGVCVAVLGGYCGWILFPNMVHKKVEQSVVIQDGSEQFKRFVNLPQPLNFKVYIFNVTN-S 70
            ::.|:|:.:|     ..|   |.:..:.:...:.:...|..:.|:|..|.|:...|::||.|| .
  Fly    21 LILAIGIFLA-----SAW---PAVSRQWIRSLLPLAPNSFIYNRWVTTPTPVYSTVFLFNWTNPG 77

  Fly    71 DRIQQGAIPIVEEIGPYVYKQFR--------QKKVKHFSRDGSKISYVQNVHF-------DFDAV 120
            |...:|..|..|::|||.:..|:        |.:|.:|.:        :..||       ..|.|
  Fly    78 DLNTEGVKPHFEQLGPYTFSDFKVKEDLEWNQPQVTYFGK--------RTWHFLPEKSNGSLDDV 134

  Fly   121 ASAPYTQDDRIVALNMHMNAFLQVFEREITDIFQGFANRLNSRLNQTPGVRVLKRLMERIRGKRK 185
            ..||:                           |......|.||               |:|...:
  Fly   135 VIAPH---------------------------FPTLTAALYSR---------------RLRRILR 157

  Fly   186 SVLQISENDPGLALLLVHLNANLKAVFNDPRSMFVSTSVREYLFDGVRFCINPQGIAKAICNQIK 250
            .|:..:.|..|.|..:.|                   :..::|||         |....:.:.::
  Fly   158 KVMNFTLNREGGATHMTH-------------------TAGQWLFD---------GYYDHLLDFVE 194

  Fly   251 ESGSKTIREKSDGSLAFSFFGHKNGS----GHEVYEVHTGKGDPMRVLEIQKLDDSHNLQVWLNA 311
            :..|..:....:   .|.:|..:|.|    |:  :.:|||:||      :.:|.|   |.:|...
  Fly   195 QLHSPLLPVYDN---TFGWFYERNNSKTAEGN--FTLHTGRGD------LSQLGD---LLLWNGE 245

  Fly   312 SSEG-ETSVCNQINGTDASAYPPFRQRGDSMYIFSADICRSVQLFYQTDIQYQGIPGYRYSIGEN 375
            ::.| ....|.::||:....:.|:|.......||..|..|.:.||.:.::...||..:||. ..|
  Fly   246 NTTGFYPGECGKVNGSTGELWSPYRTWDQPTTIFLPDAARYLNLFPKENLTIDGIDVWRYE-STN 309

  Fly   376 FINDIGP-EHDNECFCVDKLANVIKRKNGCLYAGALDL-TTCLDAPVILTLPHMLGASNEYRKMI 438
            ...|.|. ..|.||||:        :...|...|.||. ....:.|..::.||.......||:..
  Fly   310 LTIDNGQLSPDTECFCL--------KNRECPRNGVLDYGPPAFNGPFYMSHPHFFLTDQMYRENT 366

  Fly   439 RGLKPDAKKHQTFVDVQSLTGTPL 462
            .||:|:..:|..:|.::...|.||
  Fly   367 TGLQPEESEHGMYVIMEPTLGIPL 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snmp2NP_001163372.1 CD36 10..543 CDD:460076 103/476 (22%)
CG31741NP_724088.2 CD36 19..471 CDD:460076 103/479 (22%)

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