Protein Alignment Snmp2 and CG40006

DIOPT Version :10

• Sequence 1: NP_001163372.1
• Gene: Snmp2 / 38868
• FlyBaseID: FBgn0035815
• Length: 556
• Species: Drosophila melanogaster
• Sequence 2: NP_001036401.1
• Gene: CG40006 / 3355123
• FlyBaseID: FBgn0058006
• Length: 689
• Species: Drosophila melanogaster
• Alignment Length: 577
• Identity: 126/577 - (21%)
• Similarity: 215/577 - (37%)
• Gaps: 169/577 - (29%)

  Fly     5 SLIVSALGVCVAVLGGYCGWILFPNMVHKKVEQSVVIQDGSEQFKRFVNLPQPLNFKVYIFNVTN 69
            ::|.|.|   :.||..|       :::.|   ..:::.:|.|.|..:...|..|..|:|:||:||
  Fly   101 AIITSTL---IKVLEPY-------DLIFK---WKLIMTEGGEIFNLWAQPPVDLYIKIYLFNITN 152

  Fly    70 SDRIQQGAIPI-VEEIGPYVYKQFRQKKVKHFSRDGSKISYVQNVHFDF-DAVASAP-------- 124
            ::....|...: ||::||||||:.    :.|           :||.|:. :.::|.|
  Fly   153 ANAFLAGREQLRVEQVGPYVYKEI----MTH-----------ENVTFNSNNTMSSTPSHPLVWQE 202

  Fly   125 -----YTQDDRIVALNMHMNAFLQVFEREITDIFQGFANRLNSRLNQTPGVRVLKRLMERIRGKR 184
                 ..:||.:|.||:.|.|
  Fly   203 EMSGNCREDDEVVMLNIAMLA-------------------------------------------- 223

  Fly   185 KSVLQISENDPGLALLLVHLNANLKAVFNDPRSMFVSTSVREYLFDGVRFCINPQGIAKA----I 245
              :..::.|.|  .|:.:.|...|.:..::|   .|.|:.:|::|.      .|..:|..    :
  Fly   224 --ISHLTANQP--FLVRMALKTLLLSTKSEP---IVRTTAKEFMFG------YPSALATLGNTFL 275

  Fly   246 CNQIKESGSKTIREKSDGSLAFSFFGHKNGSGHEVYEVHTGKGDPMRVLEIQKLDDSHNLQVWLN 310
            .|.|.......|....|.|..|..|             :||..:|              ....|.
  Fly   276 PNWISFEKVGLIDRMYDFSTDFETF-------------YTGVPNP--------------ALSGLY 313

  Fly   311 ASSEGETSV-------CNQIN-GTDASAYPPFRQRGDSMYIFSADICRSVQLF-YQTDIQYQGIP 366
            ||..|||::       |:.|. .:|.:.:..|.|..:::..|...:||.:.|: ...:..|..:.
  Fly   314 ASYRGETTLPQWDGDHCSNIEFASDGTKFKSFIQPNETVKFFRKSMCRPINLYRVGNEKTYGSLK 378

  Fly   367 GYRYSIGENFINDIGPEHDNECFCVDKLANVIKRKNGCLYAGALDLTTC-LDAPVILTLPHMLGA 430
            ||.|...:|..::......|:|||         ||..|...|.:|:|.| ...|:.|:.||.:..
  Fly   379 GYNYVFEDNAFDNGATNEANKCFC---------RKGDCQPVGLIDVTDCYYGFPISLSFPHFMNG 434

  Fly   431 SNEYRKMIRGLKPDAKKHQTFVDVQSLTGTPLQGGKRVQFNMFLKSINRIGITENLPTVLMPAIW 495
            ....::.:.|:.||..||.:...:|..:|.||....:||.||..|.::...:......:.:|.:|
  Fly   435 DVGLQQNVTGISPDPDKHSSTFVIQPESGLPLSLSVKVQINMHFKDLSNFPVVSVFNHLTVPMLW 499

  Fly   496 VEEGIQLNGEMVAFFKKKLINTLKT-----LNIVHWATLCG---GIGVAVACLIYYI 544
            .|           ....||.::|.:     |||:......|   ||.:.::.|.|.|
  Fly   500 FE-----------IMMSKLPDSLDSRFNFYLNILPLVNPLGFWSGILLGISLLGYAI 545

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Snmp2	NP_001163372.1	CD36	10..543	CDD:460076	122/569 (21%)
CG40006	NP_001036401.1	CD36	96..545	CDD:460076	125/575 (22%)