DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Snmp2 and LOC3292631

DIOPT Version :10

Sequence 1:NP_001163372.1 Gene:Snmp2 / 38868 FlyBaseID:FBgn0035815 Length:556 Species:Drosophila melanogaster
Sequence 2:XP_061513166.1 Gene:LOC3292631 / 3292631 VectorBaseID:AGAMI1_008938 Length:494 Species:Anopheles gambiae


Alignment Length:583 Identity:128/583 - (21%)
Similarity:231/583 - (39%) Gaps:163/583 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ALGVCVAVL--GGYCGWILFPNMVHKKVEQSVVIQDGSEQFKRFVNLPQPLNFKVYIFNVTNSDR 72
            |.|..||:.  ..:.|:.| |.::.........:::|:..::.|.:...|:.|.:|:|:.||.::
Mosquito    17 AFGGVVAIFAAAAFFGFGL-PAIIDAVALTEFRVKEGARVYENFFDGEVPIFFDIYLFHWTNPEQ 80

  Fly    73 IQQGAI-PIVEEIGPYVYKQ----------------FRQKKVKHFSRDGSKISYVQNVHFDFDAV 120
            |:...: |...::||||:.:                |.||::.|:..:.|...|.          
Mosquito    81 IRDPNVRPNFVQMGPYVFSERHERGMVSFNDNDTITFNQKRIWHYMPELSNGDYF---------- 135

  Fly   121 ASAPYTQDDRIVALNMHMNAFLQVFEREITDIFQGFANRLNSRLNQTPGVRVLKRLMERIRGKRK 185
                   :||:..||                                |.:..:.:.:        
Mosquito   136 -------NDRVTTLN--------------------------------PVLATVGKTL-------- 153

  Fly   186 SVLQISENDPGLALLLVHLNANLKAVFNDPRSMFVSTSVREYLFDGVRFCINPQGIAKAICNQIK 250
                  |.||.|.||...:.||..|.|     ::....|.|.||||     :|..:...:.:.:.
Mosquito   154 ------EGDPLLPLLDGIIMANNLAEF-----LYKDVPVHEMLFDG-----HPDTLLTTLRDLLG 202

  Fly   251 ESGSKTIREKSDGSL----AFSFFGHKNGS----GHEVYEVHTGKGDPMRVLEIQKLDDSH---- 303
            .....|:   .|.||    .|.:|..:|.|    |  .:::.||             .|:|    
Mosquito   203 ALPPGTV---PDISLPPWEGFGWFVERNESLTYDG--TFQMGTG-------------TDNHINTG 249

  Fly   304 NLQVWLNASS-EGETSVCNQINGTDASAYPPF-RQRGDS---MYIFSADICRSVQLFYQTDIQYQ 363
            .::.|.||.. .....||.|:.|:....:||. |..||:   :.:|..|:|.::.|.::.:....
Mosquito   250 VMRQWNNAPQVPNYRGVCGQVRGSAGEVWPPMGRNLGDNIRPLNLFLPDLCSAITLRHEREFTVH 314

  Fly   364 GIPGYRYSIGE--NFINDIGPEH---DNECFCVDKLANVIKRKNGCLY--AGALDLTTC-LDAPV 420
            |:.|..: :|:  ||.|.    |   :.||.|...:       :.|.:  .|.||::.| ..||:
Mosquito   315 GLDGELW-VGDARNFDNG----HTIPETECQCTSPI-------DQCPFYRPGVLDVSECKFGAPL 367

  Fly   421 ILTLPHMLGASNEYRKMIRGLKPDAKKHQTFVDVQSLTGTPLQGGKRVQFNMFLKSINRIGITEN 485
            :::.||...|...||..:.|::||..||:....:...:|.|:....|:|:||.|:. |.:.:..:
Mosquito   368 VVSYPHFYLAHPSYRTAVTGMEPDRAKHEFRFALHPFSGIPMAANGRIQYNMHLRD-NGMALFRD 431

  Fly   486 LPTVLMPAIWVEEGIQLNGEMVAFFKKKLINTLKTLNIVHWA------TLCGGIGVAVACLIY 542
            :|.|::||.|:|:.:.|.        |.:.:.||.:..:.|.      .|||...:.:...:|
Mosquito   432 VPDVIIPAFWIEQRMVLT--------KDIADDLKLIEDLRWGFIYTAFALCGVAALLLGLSLY 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snmp2NP_001163372.1 CD36 10..543 CDD:460076 128/583 (22%)
LOC3292631XP_061513166.1 None

Return to query results.
Submit another query.