Protein Alignment Snmp2 and Scarb1

DIOPT Version :10

• Sequence 1: NP_001163372.1
• Gene: Snmp2 / 38868
• FlyBaseID: FBgn0035815
• Length: 556
• Species: Drosophila melanogaster
• Sequence 2: NP_113729.1
• Gene: Scarb1 / 25073
• RGDID: 2302
• Length: 509
• Species: Rattus norvegicus
• Alignment Length: 548
• Identity: 139/548 - (25%)
• Similarity: 230/548 - (41%)
• Gaps: 110/548 - (20%)

  Fly     6 LIVSALGVCVAVLGGYCGWILFPNMVHKKVEQSVVIQDGSEQFKRFVNLPQPLNFKVYIFNVTNS 70
            |:.:||||.:.        ::.|:::.::|.::|.|...|..|..:..:|.|....||.|.|.|.
  Rat    19 LLCAALGVIMI--------LMVPSLIKQQVLKNVRIDPSSLSFGMWKEIPVPFYLSVYFFEVVNP 75

  Fly    71 DRIQQGAIPIVEEIGPYVYKQFRQKKVKHFSRDGSKISYVQNVHFDFDAVASAPYTQDDRIVALN 135
            ..:..|..|:|.|.|||||::||| ||.....|...:||::|....|....|.. ::.|.||..|
  Rat    76 SEVLNGQKPVVRERGPYVYREFRQ-KVNITFNDNDTVSYIENRSLRFQPDRSQG-SESDYIVLPN 138

  Fly   136 MHMNAFLQVFEREITDIFQGFANRLNSRLNQTPGVRVLKRLMERIRGKRKSVLQISENDPGLALL 200
            :.:.....:.|.:.|.:          :|..|.|:..:        |:|
  Rat   139 ILVLGGAVMMEDKPTSL----------KLLMTLGLVTM--------GQR---------------- 169

  Fly   201 LVHLNANLKAV---FNDPRSMFVSTSVREYLFDGVRFCINPQGIAKAICNQIKESGSKTIREKSD 262
             ..:|..:..:   :.||...|:|    :|..|  .|.|..:
  Rat   170 -AFMNRTVGEILWGYEDPFVNFLS----KYFPD--MFPIKGK----------------------- 204

  Fly   263 GSLAFSFFGHKNGSGHEVYEVHTGKGDPMRVLEIQKLDDSHNLQVWLNASSE---GETSVCNQIN 324
                |..|...|.|...|:.|.||         :|.....|.:..| |..||   ..:..||.||
  Rat   205 ----FGLFVGMNDSSSGVFTVFTG---------VQNFSKIHLVDKW-NGLSEVNYWHSEQCNMIN 255

  Fly   325 GTDASAYPPFRQRGDSMYIFSADICRSVQLFYQTDIQYQGIPGYRYSIGENFINDIGPEHDNECF 389
            ||....:.||.....|:..||.:.|||::|.||....::|||.||::..:....:......||.|
  Rat   256 GTAGQMWAPFMTPESSLEFFSPEACRSMKLTYQESRVFEGIPTYRFTAPDTLFANGSVYPPNEGF 320

  Fly   390 CVDKLANVIKRKNGCLYAGALDLTTC-LDAPVILTLPHMLGASNEYRKMIRGLKPDAKKHQTFVD 453
            |            .|..:|..:::|| ..||:.|:.||...|.....:.:.||.||.|:|..|:|
  Rat   321 C------------PCRESGIQNVSTCRFGAPLFLSQPHFYNADPVLSEAVLGLNPDPKEHSLFLD 373

  Fly   454 VQSLTGTPLQGGKRVQFNMFLKSINRIGITENLPTVLMPAIWVEEGIQLNGEMVAFFKKKLINTL 518
            :..:||.|:....::|.::::||:..:|.|..:..|::|.:|.|:...:.|:.:..|..:|:...
  Rat   374 IHPVTGIPMNCSVKMQLSLYIKSVKGVGQTGKIEPVVLPLLWFEQSGMMGGKTLNTFYTQLVLMP 438

  Fly   519 KTLNIVHWATLCGGIGVAVACLIYYIYQ 546
            :.|:...:..|  |:| .:..|:..|||
  Rat   439 QVLHYAQYVLL--GLG-GLLLLVPIIYQ 463

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Snmp2	NP_001163372.1	CD36	10..543	CDD:460076	135/539 (25%)
Scarb1	NP_113729.1	CD36	21..447	CDD:460076	131/525 (25%)