Protein Alignment Snmp2 and Scarb1

DIOPT Version :10

• Sequence 1: NP_001163372.1
• Gene: Snmp2 / 38868
• FlyBaseID: FBgn0035815
• Length: 556
• Species: Drosophila melanogaster
• Sequence 2: NP_001192012.1
• Gene: Scarb1 / 20778
• MGIID: 893578
• Length: 520
• Species: Mus musculus
• Alignment Length: 557
• Identity: 138/557 - (24%)
• Similarity: 235/557 - (42%)
• Gaps: 105/557 - (18%)

  Fly     4 W-SLIVSALGVCVAVLGGYCGWILFPNMVHKKVEQSVVIQDGSEQFKRFVNLPQPLNFKVYIFNV 67
            | :|.:.|||:..|.| |....::.|:::.::|.::|.|...|..|..:..:|.|....||.|.|
Mouse     9 WVALGLGALGLLFAAL-GVVMILMVPSLIKQQVLKNVRIDPSSLSFGMWKEIPVPFYLSVYFFEV 72

  Fly    68 TNSDRIQQGAIPIVEEIGPYVYKQFRQKKVKHFSRDGSKISYVQN--VHFDFDAVASAPYTQDDR 130
            .|.:.:..|..|:|.|.|||||::||| ||.....|...:|:|:|  :||..|   .:..::.|.
Mouse    73 VNPNEVLNGQKPVVRERGPYVYREFRQ-KVNITFNDNDTVSFVENRSLHFQPD---KSHGSESDY 133

  Fly   131 IVALNMHMNAFLQVFEREITDIFQGFANRLNSRLNQTPGVRVL--KRLMERIRGKRKSVLQISEN 193
            ||                                  .|.:.||  ..|||......|.::.::..
Mouse   134 IV----------------------------------LPNILVLGGSILMESKPVSLKLMMTLALV 164

  Fly   194 DPGLALLLVHLNANLKAVFNDPRSMFVSTSVREYLFDGVRFCINPQGIAKAICNQIKESGSKTIR 258
            ..|....:......:...::||...|::|.:.:.|                           .|:
Mouse   165 TMGQRAFMNRTVGEILWGYDDPFVHFLNTYLPDML---------------------------PIK 202

  Fly   259 EKSDGSLAFSFFGHKNGSGHEVYEVHTGKGDPMRVLEIQKLDDSHNLQVWLNASSEGETSVCNQI 323
            .|      |..|...|.|...|:.|.||..:..|:..:.|.:....:..|       .:..||.|
Mouse   203 GK------FGLFVGMNNSNSGVFTVFTGVQNFSRIHLVDKWNGLSKIDYW-------HSEQCNMI 254

  Fly   324 NGTDASAYPPFRQRGDSMYIFSADICRSVQLFYQTDIQYQGIPGYRYSIGENFINDIGPEHDNEC 388
            |||....:.||.....|:..||.:.|||::|.|.....::|||.||::..:....:......||.
Mouse   255 NGTSGQMWAPFMTPESSLEFFSPEACRSMKLTYNESRVFEGIPTYRFTAPDTLFANGSVYPPNEG 319

  Fly   389 FCVDKLANVIKRKNGCLYAGALDLTTC-LDAPVILTLPHMLGASNEYRKMIRGLKPDAKKHQTFV 452
            ||            .|..:|..:::|| ..||:.|:.||...|.....:.:.||.|:.|:|..|:
Mouse   320 FC------------PCRESGIQNVSTCRFGAPLFLSHPHFYNADPVLSEAVLGLNPNPKEHSLFL 372

  Fly   453 DVQSLTGTPLQGGKRVQFNMFLKSINRIGITENLPTVLMPAIWVEEGIQLNGEMVAFFKKKLINT 517
            |:..:||.|:....::|.::::||:..||.|..:..|::|.:|.|:...:.|:.::.|..:|:..
Mouse   373 DIHPVTGIPMNCSVKMQLSLYIKSVKGIGQTGKIEPVVLPLLWFEQSGAMGGKPLSTFYTQLVLM 437

  Fly   518 LKTLNIVHWATLCGGIG-----VAVAC-LIYYIYQRG 548
            .:.|:...:..|  |:|     |.:.| |...:.:||
Mouse   438 PQVLHYAQYVLL--GLGGLLLLVPIICQLRSQVSRRG 472

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Snmp2	NP_001163372.1	CD36	10..543	CDD:460076	134/543 (25%)
Scarb1	NP_001192012.1	CD36	26..447	CDD:460076	122/510 (24%)