DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snmp2 and LOC1275122

DIOPT Version :10

Sequence 1:NP_001163372.1 Gene:Snmp2 / 38868 FlyBaseID:FBgn0035815 Length:556 Species:Drosophila melanogaster
Sequence 2:XP_001688563.1 Gene:LOC1275122 / 1275122 VectorBaseID:AGAMI1_009113 Length:531 Species:Anopheles gambiae


Alignment Length:552 Identity:119/552 - (21%)
Similarity:222/552 - (40%) Gaps:112/552 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SLIVSALGVCVAVLGGYCGWILFPNMVHKKVEQSVVIQDGSEQFKRFVNLP-QPLNFKVYIFNVT 68
            :.|.||:|..:.       |  |.||.:..:.:.:::.:.|...:.:.|.| .|| .||::||.|
Mosquito    67 TFITSAIGFFIM-------W--FTNMYNNSLLEKLILSENSTAAEWWENPPVYPL-LKVHVFNYT 121

  Fly    69 NSDRIQQG-AIPI-VEEIGPYVYKQFRQKKVKHFSRDGSKISYVQNVHFDF--DAVASAPYTQDD 129
            |::....| |..: ||::||||||:...|.....:.||: |||.::.:..:  :.....|:   |
Mosquito   122 NTEDFFAGKATKLQVEDLGPYVYKETANKVDITHNGDGT-ISYREHRYIQYLPEESKGKPF---D 182

  Fly   130 RIVALNMHMNAFLQVFEREITDIFQGFANRL--NSRLNQTPGVRVLKRLME-RIRGKRKSVLQIS 191
            ::|..|:   .||....::.:   :|..|::  |...:.:.....:|:.:| .:.|....:|.::
Mosquito   183 QVVVPNV---VFLTGVSKKRS---EGTWNQIAFNMAASSSGSSAFIKKPVESMLWGYEDKLLSLA 241

  Fly   192 ENDPGLALLLVHLNANLKAVFNDPRSMFVSTSVREYLFDGVRFCINPQGIAKAICNQIKESGSKT 256
                                    :|||.|..|                                
Mosquito   242 ------------------------KSMFGSDIV-------------------------------- 250

  Fly   257 IREKSDGSLAFSFFGHKNGSGHEVYEVHTGKGDPMRVLEIQKLDDSHNLQVWLNASSEGETSVCN 321
                   |.:|.....:||:..|.:.:.:|:.....:..|:.||....|.:|       .|..|:
Mosquito   251 -------SSSFGMLMTRNGTSAENFTIFSGESSLEDLAVIKHLDGKSRLDLW-------HTDECD 301

  Fly   322 QINGTDASAYPP-FRQRGDSMYIFSADICRSVQLFYQTDI-QYQGIPGYRYSIGENFINDIGPEH 384
            ::.|||.|.:|| ...|...:.:|...:||...|.|.::: ...|||.:||.|..|..:......
Mosquito   302 RVGGTDGSQFPPHLMDRKHPLQVFIKSLCRKFPLVYDSEVTALDGIPAWRYKIPNNVFSHPDEHM 366

  Fly   385 DNECFCVDKLANVIKRKNGCLYAGALDLTTC-LDAPVILTLPHMLGASNEYRKMIRGLKPDAKKH 448
            .|.|||       ......|..:|..::|.| :.||:..:.||......:..:.|.|:.|..:||
Mosquito   367 PNHCFC-------HLESGSCPPSGLFNITGCSMGAPIFASFPHFYTGDRKLIESIEGVNPVQEKH 424

  Fly   449 QTFVDVQSLTGTPLQGGKRVQFNMFLKSINRI-GITENLPTVLMPAIWVEEGIQLNGEMVAFFKK 512
            :|:.|:......|:.|..|.|.|:.::....: |:.:......:|.||:|   .:.|.:....:.
Mosquito   425 ETYADIHPRLAFPIDGASRFQINIQVQKAAMVSGLEKFTEGQYLPVIWLE---VVPGVISDDLRA 486

  Fly   513 KLINTLKTLNIVHWATLCGGIGVAVACLIYYI 544
            .:.::..:.|.:..:...|.:...|..::..|
Mosquito   487 MIYHSTYSANAIQMSLRVGSLAFFVLSVVLLI 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snmp2NP_001163372.1 CD36 10..543 CDD:460076 116/544 (21%)
LOC1275122XP_001688563.1 CD36 63..518 CDD:460076 118/550 (21%)

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