DRSC/TRiP Functional Genomics Resources

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Protein Alignment NOTCH2NLA and Notch2

DIOPT Version :10

Sequence 1:NP_001382160.1 Gene:NOTCH2NLA / 388677 HGNCID:31862 Length:286 Species:Homo sapiens
Sequence 2:NP_077334.2 Gene:Notch2 / 29492 RGDID:3188 Length:2471 Species:Rattus norvegicus


Alignment Length:226 Identity:198/226 - (87%)
Similarity:208/226 - (92%) Gaps:0/226 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     2 CRDGYEPCVNEGMCVTYHNGTGYCKCPEGFLGEYCQHRDPCEKNRCQNGGTCVAQAMLGKATCRC 66
            ||.|.|||||||.|||||||||||:||||||||||||||||||||||||||||.|||||||||||
  Rat    28 CRGGQEPCVNEGTCVTYHNGTGYCRCPEGFLGEYCQHRDPCEKNRCQNGGTCVTQAMLGKATCRC 92

Human    67 ASGFTGEDCQYSTSHPCFVSRPCLNGGTCHMLSRDTYECTCQVGFTGKECQWTDACLSHPCANGS 131
            |.|||||||||||||||||||||.|||||||||.||||||||||||||:|||||.||||||.|||
  Rat    93 APGFTGEDCQYSTSHPCFVSRPCQNGGTCHMLSWDTYECTCQVGFTGKQCQWTDVCLSHPCENGS 157

Human   132 TCTTVANQFSCKCLTGFTGQKCETDVNECDIPGHCQHGGTCLNLPGSYQCQCLQGFTGQYCDSLY 196
            ||::|||||||:|..|.|||||:.|:|||||||.||||||||||||||:|||.||||||:|||.|
  Rat   158 TCSSVANQFSCRCPAGITGQKCDADINECDIPGRCQHGGTCLNLPGSYRCQCPQGFTGQHCDSPY 222

Human   197 VPCAPSPCVNGGTCRQTGDFTFECNCLPGKE 227
            |||||||||||||||||||||.||:||||.|
  Rat   223 VPCAPSPCVNGGTCRQTGDFTSECHCLPGFE 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NOTCH2NLANP_001382160.1 EGF_CA 83..117 CDD:238011 30/33 (91%)
EGF_CA 120..154 CDD:238011 25/33 (76%)
EGF_CA 156..192 CDD:238011 31/35 (89%)
Notch2NP_077334.2 EGF_CA 109..143 CDD:238011 30/33 (91%)
EGF_CA 182..218 CDD:238011 31/35 (89%)
EGF_CA 260..296 CDD:238011
EGF_CA 298..335 CDD:238011
EGF_CA 415..454 CDD:238011
EGF_CA 456..492 CDD:238011
EGF_CA 495..530 CDD:238011
EGF_CA 532..567 CDD:238011
EGF_CA 570..604 CDD:238011
EGF_CA 608..643 CDD:238011
EGF_CA 645..679 CDD:238011
EGF_CA 682..717 CDD:238011
EGF_CA 757..793 CDD:238011
EGF_CA 795..831 CDD:238011
EGF_CA 873..909 CDD:238011
EGF_CA 911..947 CDD:238011
EGF_CA 949..985 CDD:238011
EGF_CA 987..1022 CDD:238011
EGF_CA 1025..1061 CDD:238011
EGF_CA 1117..1147 CDD:238011
EGF_CA 1151..1185 CDD:238011
EGF_CA 1188..1223 CDD:238011
EGF_CA 1225..1262 CDD:238011
EGF_CA 1264..1302 CDD:238011
EGF_CA <1312..1343 CDD:238011
Notch 1423..1456 CDD:459658
Negative regulatory region (NRR). /evidence=ECO:0000250 1425..1677
Notch 1463..1497 CDD:459658
Notch 1501..1534 CDD:459658
NOD 1539..1594 CDD:462014
NODP 1618..1673 CDD:462229
JMTM_Notch2 1659..1740 CDD:411986
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1751..1788
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1794..1813
ANK repeat 1827..1874 CDD:293786
ANK 1 1827..1871
ANKYR <1851..2066 CDD:440430
ANK 2 1876..1905
ANK repeat 1877..1907 CDD:293786
ANK 3 1909..1939
ANK repeat 1943..1974 CDD:293786
ANK 4 1943..1972
ANK repeat 1976..2007 CDD:293786
ANK 5 1976..2005
ANK repeat 2009..2040 CDD:293786
ANK 6 2009..2038
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2097..2116
Atrophin-1 2105..>2422 CDD:460830
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2380..2471
Blue background indicates that the domain is not in the aligned region.

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