DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8492 and LysD

DIOPT Version :10

Sequence 1:NP_648151.2 Gene:CG8492 / 38866 FlyBaseID:FBgn0035813 Length:1360 Species:Drosophila melanogaster
Sequence 2:NP_476823.1 Gene:LysD / 38127 FlyBaseID:FBgn0004427 Length:140 Species:Drosophila melanogaster


Alignment Length:132 Identity:51/132 - (38%)
Similarity:72/132 - (54%) Gaps:11/132 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   438 GKVYNRCELAQELYFSHKFPMQDLATWVCIAEHESSFNTTAVGRLNADGSADHGLFQISDLYWCT 502
            |:..:||.||:|: .:...|...||.|.||||||||:.|..||..|.:||.|:|:|||:|.|||.
  Fly    18 GRTMDRCSLAREM-SNLGVPRDQLARWACIAEHESSYRTGVVGPENYNGSNDYGIFQINDYYWCA 81

  Fly   503 HNDG--GGKGCHIDCNRLLDSDITDDVKCVRTIHEEHTRISGDGFTAWTVYNGHCRQKTRADVAN 565
            ...|  ....|.:.||.||..|||..|:|.:.:      :|..|::||:.:  |........:.:
  Fly    82 PPSGRFSYNECGLSCNALLTDDITHSVRCAQKV------LSQQGWSAWSTW--HYCSGWLPSIDD 138

  Fly   566 CF 567
            ||
  Fly   139 CF 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8492NP_648151.2 LYZ_C_invert 18..144 CDD:381618
LYZ_C_invert 185..301 CDD:381618
LYZ_C_invert 439..566 CDD:381618 48/128 (38%)
LYZ_C_invert 596..723 CDD:381618
Herpes_BLLF1 <823..1261 CDD:282904
PHA03255 937..>1067 CDD:165513
LysDNP_476823.1 LYZ_C_invert 19..139 CDD:381618 48/128 (38%)
Blue background indicates that the domain is not in the aligned region.

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