DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8492 and LysX

DIOPT Version :9

Sequence 1:NP_648151.2 Gene:CG8492 / 38866 FlyBaseID:FBgn0035813 Length:1360 Species:Drosophila melanogaster
Sequence 2:NP_523881.1 Gene:LysX / 38122 FlyBaseID:FBgn0004431 Length:142 Species:Drosophila melanogaster


Alignment Length:139 Identity:51/139 - (36%)
Similarity:76/139 - (54%) Gaps:15/139 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   590 SPTPKAKIYNRCELAKELYHRHKFPMREIPTWVCIAEHESSFNTAAVGKLNADGSEDHGLFQISD 654
            :|....:..:||.||:|:.:. .....::..|.||||||||:.|..||..|.|||.|:|:|||:|
  Fly    14 TPAVLGRTMDRCSLAREMANM-GVSRDQLSKWACIAEHESSYRTGVVGPPNTDGSNDYGIFQIND 77

  Fly   655 IYWCTHDQTSGK----ACHIECDRLLDSDISDDVQCIRTIHEEHTRLSGDGFNAWTVYNGHCRNQ 715
            :|||  ..:|||    .|.:.|:.||..||...|:|...:      |...|::||:.:: :|...
  Fly    78 MYWC--QPSSGKFSHNGCDVSCNALLTDDIKSSVRCALKV------LGQQGWSAWSTWH-YCSGY 133

  Fly   716 NLAKLSDCF 724
             |..:.|||
  Fly   134 -LPPIDDCF 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8492NP_648151.2 LYZ1 18..142 CDD:238066
LYZ1 185..312 CDD:238066
LYZ1 439..566 CDD:238066
LYZ1 596..723 CDD:238066 47/130 (36%)
PARM 937..>1068 CDD:293666
LysXNP_523881.1 lysozyme_like 20..140 CDD:294153 47/130 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45458885
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2BPI7
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D116778at33392
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9324
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11407
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.850

Return to query results.
Submit another query.