DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7457 and bard1

DIOPT Version :9

Sequence 1:NP_001303376.1 Gene:CG7457 / 38865 FlyBaseID:FBgn0035812 Length:1405 Species:Drosophila melanogaster
Sequence 2:XP_017952998.2 Gene:bard1 / 100498289 XenbaseID:XB-GENE-492035 Length:781 Species:Xenopus tropicalis


Alignment Length:732 Identity:157/732 - (21%)
Similarity:247/732 - (33%) Gaps:251/732 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   275 NTPDENDRVNIEKQLRIVVKVCQTLDELVLTSSVD--YAKLKGLY---EKLG-----------DG 323
            |||.....|.|.:||..::::|..|..|:.....|  :::.:|::   :|:|           |.
 Frog    80 NTPAWACDVQINRQLDNMIQLCADLRNLLSKGKTDGPWSRHEGIHSNQKKVGSILIFRKENKMDL 144

  Fly   324 C---CHLMN--YEKALTYYQKM------------LENAELNQESGKSLVPIYVSLYQTYRDNGQF 371
            |   .|.:|  .||......||            :|..|.:|:......|...| |:...|:...
 Frog   145 CQDMLHRLNPANEKHKKKQIKMWFSPRTRKVRCVMEKTERSQQFSSKTCPQMTS-YEYVSDSPDS 208

  Fly   372 D-------------KALEYLWKEFELN-----------------------------QDAP----- 389
            :             |.|:.:.:|:.::                             |.:|     
 Frog   209 EPVKKKPDPKPRKNKKLKDINREWGIDTGNEIDELSNPSKEHKSGKSVSFCGSMIMQHSPEVVVQ 273

  Fly   390 -SEAFTTL---------CTIAEICEQQSHPFWTVH----DVYQKALRQADKAGSCSDKL----VK 436
             |....||         |.:.|..|.||:....|:    ....|...:.:|......|.    :.
 Frog   274 SSLKNDTLEEINPPKNQCGLDEPVEMQSNSLKEVNCPSPSATFKNQNKEEKTNPVKRKKNLTPIS 338

  Fly   437 IAMVRLRRLMLKHNMQVLVE-NLEADATAKGIDLDQEESVGDDEEESDGGGTAVQQNTPDWDDDF 500
            .|..||||    .:..:|.| :|:|::..||..........::.|.::   ||            
 Frog   339 SASKRLRR----RSSDILNERSLKANSPDKGTKTASRHKSAENTESTE---TA------------ 384

  Fly   501 DLATLTDSDASDLDETEKPRPQRTTRG-------------NRTLVIKKNNKGETQLHQACISGNL 552
                  ..||. :..|..|..::...|             |....:|:|:||||.||.|.|.|::
 Frog   385 ------QCDAK-MCSTPPPHAKQKNGGKSGQKITTVQISPNNLTNVKRNHKGETMLHLASIKGDI 442

  Fly   553 ELVRRLIDQGHTVNVRDHAGWLPLHEACNHGYREIVELLLDKGAASAINDKGGTSCDGITPLFDA 617
            :.|..|:..|...||:|:|||.|||||||.|:..||||||...|  .:|.   |.....|||.||
 Frog   443 QGVEDLLKSGANPNVKDNAGWTPLHEACNLGHTVIVELLLQHHA--LVNT---TGYQNDTPLHDA 502

  Fly   618 CSNGFLDVAELLLDRGADATV-------RTDYNET---------------------CIAGLDKWR 654
            ..||.:.:.:|||..||....       ..||.||                     |:......|
 Frog   503 VKNGHIAIVQLLLSHGASQEAVNIFGLQPVDYAETEKMKSVLLETQTTRNRLLLRPCLEPSSHQR 567

  Fly   655 QGAQLV---DGEQA-QYAQLRERLLRTLSKVGICSDKNAR---------PLTNFNAKRISREERG 706
            :...:|   .|..| |.|.| .:|.:|| |..:|::.:.:         ||.     |..:...|
 Frog   568 KEETVVLIASGLLATQRADL-TKLAKTL-KAEVCAEYDGKVTHVIVSDEPLL-----RTMKCMMG 625

  Fly   707 ------------------SMSEEEDEEEALHESNRRSLSHNRSGSEYGAKKSKSSTQP------- 746
                              |...|.:|...:|....|            |:.:|....|       
 Frog   626 ILAGCWTLRFAWVKACLESCDREPEEPYEIHSGPHR------------ARLNKQQLLPQLLDGCH 678

  Fly   747 ----SASKEYR-------------SVMAHLKRPNRLNDDPPSTSTLNKHKRNAFLSEDEVDADNW 794
                ...||:|             .::....:|     |...|.|:|....:|....|:.....:
 Frog   679 FYFLGCFKEHRKEDLVELVKAAGGQILIRQPKP-----DSDVTQTINTVAYHAEADSDQRFCTQY 738

  Fly   795 LIDDVGPERKRKRINSG 811
            ::.|...:.:.:|:..|
 Frog   739 IVYDRTSKYRPERVRQG 755

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7457NP_001303376.1 TPR_12 21..95 CDD:290160
TPR 68..387 CDD:223533 32/186 (17%)
TPR repeat 163..191 CDD:276809
TPR repeat 196..233 CDD:276809
TPR repeat 238..273 CDD:276809
TPR repeat 316..342 CDD:276809 10/56 (18%)
TPR repeat 347..384 CDD:276809 8/49 (16%)
TPR repeat 389..422 CDD:276809 11/51 (22%)
ANK 535..647 CDD:238125 52/139 (37%)
ANK repeat 539..569 CDD:293786 13/29 (45%)
Ank_2 543..639 CDD:289560 43/102 (42%)
ANK repeat 571..604 CDD:293786 19/32 (59%)
ANK repeat 609..639 CDD:293786 12/36 (33%)
LRR_RI 1063..1360 CDD:238064
leucine-rich repeat 1088..1115 CDD:275381
leucine-rich repeat 1116..1170 CDD:275381
leucine-rich repeat 1199..1225 CDD:275381
leucine-rich repeat 1226..1261 CDD:275381
leucine-rich repeat 1262..1289 CDD:275381
leucine-rich repeat 1290..1315 CDD:275381
bard1XP_017952998.2 RING-HC_BARD1 41..84 CDD:319410 3/3 (100%)
PHA02876 <324..>532 CDD:165207 71/238 (30%)
ANK repeat 429..459 CDD:293786 13/29 (45%)
Ank_2 433..525 CDD:403870 43/96 (45%)
ANK repeat 461..492 CDD:293786 19/35 (54%)
ANK repeat 494..525 CDD:293786 12/30 (40%)
BRCT_Bard1_rpt1 572..648 CDD:349366 16/82 (20%)
BRCT_Bard1_rpt2 673..773 CDD:349352 13/88 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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